DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN2 and cdh15

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_002933722.3 Gene:cdh15 / 100489106 XenbaseID:XB-GENE-983662 Length:791 Species:Xenopus tropicalis


Alignment Length:804 Identity:186/804 - (23%)
Similarity:319/804 - (39%) Gaps:183/804 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 EDDRNLPKRILQVTATDGDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQP 212
            |:.|.||..::|:.:   |......::|.:.|.|:|.:  ....|.||:.||::.:...|||::.
 Frog    64 ENFRRLPMLLVQLKS---DKQHHGRVIYSIKGPGVDEE--PRGIFTINKNTGEVSLNAVLDREKT 123

  Fly   213 NGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAV 277
            .   :::...||.||.|..|.....:::.:.|.|||.|.|.|.::.|::.|....|:.|:.:.|.
 Frog   124 E---RFKLQAFAVDEVGLTLEDPTKLEIVVLDQNDN
RPVFVQEVFTGHLAEGAIPGTFVLKVEAT 185

  Fly   278 DYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDRERTPDY--SIQVVAMD 340
            |.||| .:.||:|.|||    |:::| ..:|.|...||.|:|....||||....|  :|||..|.
 Frog   186 DADDP-RTDNAELKYSI----IQQDT-PEMFSINQNTGEIRTVQVGLDREVVGFYNLTIQVADML 244

  Fly   341 GGGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVV 405
            |.||..|..|.|.::|:||.||:|.: |:..||.|...    ...|..|.|.|:|...:..:||.
 Frog   245 GEGLTNTARAVITIEDINDN
PPEFMQ-EFSMEVPENRS----NLDIGRVNVTDKDLPGSVNWKVR 304

  Fly   406 PNSGFGADKFAM-VRNGDGT--GSLKIIQPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVA 467
            .....|..|.|. :|....|  |.|.:::|||:|   :...::..|.|.::.:..| .:.:...:
 Frog   305 YFITKGDIKRAFSIRTDPQTNDGILSLVKPLDHE---EQEFYQLTISVENEAELSP-SAPRPSRS 365

  Fly   468 YSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATDADQGGHSKVAYKIV------- 525
            .:.|.:.::::|: .|.|......|.:.|....|:.:..:.|.|.|.....|:.|.:|       
 Frog   366 QTQVNITV
KNLNE-PPVFSENPKVVRVKERLAAGSDITVYTAVDPDSKQTQKIRYSVVSDPANWL 429

  Fly   526 ----RSTNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILAIDDGSPARTATATLTVIVKDVNDN 586
                .|...:.::|: ||.:..:||       ..:...|.|.|:..|...:|..|:|.|::|||:
 Frog   430 SLDENSGQLRARYAL-DRKSPFLQR-------GWYTALIAATDNAVPPLNSTGILSVEVQEVNDH 486

  Fly   587 APTFAQDYKPTLPENVSGKKILEVAAKDPDDRLRGNGGPFTFRLDPLASDEIKAGFKVEYDRRGD 651
            ||............:..|..:|..|:   |:.:.....||.|:|| .:..|:.:.:.:  ....|
 Frog   487 APVLLPHLGDMCKNSQPGSGMLLTAS---DEDMPPQAHPFHFQLD-TSFTELTSNWSL--SPVND 545

  Fly   652 NENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTSTLTVTI------------------- 697
            ....:.:|:.::      :..|.:|..:.|:|.|.:.....|.|::                   
 Frog   546 THALLQLIADVQ------EGVYTLPFWVSDSGNPPLAQVQFLNVSVCMCDALGTCKGNAVALFGS 604

  Fly   698 ----------------------------------GDVNDNKMQPGSKSVL--VYNY--QGQSQDT 724
                                              |||:...:......|.  ::||  ||..:: 
 Frog   605 GTGISLSALIIIMSSIALLLVLVLLLLLFRCSRSGDVHKGLLADSEDDVRDNIFNYDEQGGGEE- 668

  Fly   725 PIGRVYVNDPDDWD----------VP-----------DKKYYWEVQEHQRFKLDTDTGILTMRAG 768
                    |.|.:|          ||           |..|...:..:.|...|..:.|...   
 Frog   669 --------DQDGYDIIRLRNPGLSVPPSPRLKPPIRRDTPYNQTLPRYPRRPTDRPSDIADF--- 722

  Fly   769 TRRGRYQLRFKVYD---REHGQEDIPANLSVTVRDITAEAVQQAGSMR--LSHITDE----DFVR 824
                       ::|   .......:|...:..:.|...|. ..||::.  ||...|.    |:::
 Frog   723 -----------IHDGLQAADSDPSVPPYDTALIYDYEGEG-SVAGTLSSILSSEEDSDQEYDYLQ 775

  Fly   825 TWNPVKNQVEPSKLERFRNKLAEL 848
            .|.|           ||| :||::
 Frog   776 EWGP-----------RFR-RLADM 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637 26/99 (26%)
Cadherin_repeat 256..359 CDD:206637 39/104 (38%)
Cadherin_repeat 379..481 CDD:206637 23/104 (22%)
Cadherin_repeat 489..586 CDD:206637 25/107 (23%)
Cadherin_repeat 594..703 CDD:206637 22/161 (14%)
Cadherin_repeat 724..801 CDD:206637 12/100 (12%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
cdh15XP_002933722.3 Cadherin_repeat 60..156 CDD:206637 26/99 (26%)
Cadherin_repeat 164..264 CDD:206637 40/105 (38%)
Cadherin 272..373 CDD:394985 25/108 (23%)
Cadherin_repeat 388..486 CDD:206637 25/105 (24%)
Cadherin_C 642..791 CDD:395833 32/182 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5175
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24027
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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