DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CadN2 and fat1

DIOPT Version :9

Sequence 1:NP_001036368.2 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_004911243.1 Gene:fat1 / 100489070 XenbaseID:XB-GENE-920279 Length:4664 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_001036368.2 Cadherin_repeat 41..132 CDD:206637
Cadherin_repeat 140..248 CDD:206637
Cadherin_repeat 256..359 CDD:206637
Cadherin_repeat 379..481 CDD:206637
Cadherin_repeat 489..586 CDD:206637
Cadherin_repeat 594..703 CDD:206637
Cadherin_repeat 724..801 CDD:206637
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 <1233..1259 CDD:285248
Laminin_G_2 1293..1428 CDD:280389
EGF_CA 1497..1535 CDD:238011
Cadherin_C 1583..1719 CDD:279398
fat1XP_004911243.1 Cadherin_repeat 81..187 CDD:206637
Cadherin_repeat 196..296 CDD:206637
E_set 317..396 CDD:298831
Cadherin_repeat 414..502 CDD:206637
Cadherin_repeat 510..608 CDD:206637
Cadherin_repeat 618..707 CDD:206637
Cadherin_repeat 767..861 CDD:206637
Cadherin_repeat 869..966 CDD:206637
Cadherin_repeat 975..1071 CDD:206637
Cadherin_repeat 1085..1178 CDD:206637
Cadherin_repeat 1186..1284 CDD:206637
Cadherin_repeat 1293..1387 CDD:206637
Cadherin_repeat 1405..1495 CDD:206637
Cadherin_repeat 1504..1601 CDD:206637
Cadherin_repeat 1610..1704 CDD:206637
Cadherin_repeat 1714..1804 CDD:206637
Cadherin_repeat 1813..1917 CDD:206637
Cadherin_repeat 1938..2013 CDD:206637
Cadherin_repeat 2026..2120 CDD:206637
Cadherin_repeat 2128..2217 CDD:206637
Cadherin_repeat 2230..2322 CDD:206637
Cadherin_repeat 2330..2429 CDD:206637
Cadherin_repeat 2437..2531 CDD:206637
Cadherin_repeat 2539..2635 CDD:206637
Cadherin_repeat 2643..2737 CDD:206637
Cadherin_repeat 2751..2848 CDD:206637
Cadherin_repeat 2856..2957 CDD:206637
Cadherin_repeat 2965..3062 CDD:206637
Cadherin_repeat 3070..3164 CDD:206637
Cadherin_repeat 3172..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3382..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3604..3674 CDD:206637
LamG 3897..4028 CDD:214598
EGF_CA 4060..4092 CDD:238011
EGF_CA 4096..4131 CDD:238011
EGF 4136..4165 CDD:278437
EGF_CA 4170..4206 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.