DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CadN2 and CDH3

DIOPT Version :10

Sequence 1:NP_609855.3 Gene:CadN2 / 35071 FlyBaseID:FBgn0262018 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_001784.2 Gene:CDH3 / 1001 HGNCID:1762 Length:829 Species:Homo sapiens


Alignment Length:899 Identity:202/899 - (22%)
Similarity:332/899 - (36%) Gaps:281/899 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 RNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFL 177
            |..|.::....|:|.:....|                   .|:|:.|:.:   :.||...|.|.:
Human   103 RRHKRDWVVAPISVPENGKGP-------------------FPQRLNQLKS---NKDRDTKIFYSI 145

  Fly   178 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVF--AQDEGGEGLVGYADIQV 240
            ||.|  .|:|....|.:.:.||.:.:.|||||::..     ::.:|  |..|.|..:....:|.:
Human   146 TGPG--ADSPPEGVFAVEKETGWLLLNKPLDREEIA-----KYELFGHAVSENGASVEDPMNISI 203

  Fly   241 NLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGA 305
            .:.|.||:.|:|.|..:.|:|.|....|:|||.::|.|.||...:.|..:.|||.    .:|...
Human   204 IVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVTATDEDDAIYTYNGVVAYSIH----SQEPKD 264

  Fly   306 P---IFEIEPETGLIKTAVCCLDRERTPDY--SIQVVAMDGGGLKGTGTASIRVKDLNDMPPQFT 365
            |   :|.|...||.|......||||:.|:|  :||...|||.|...|..|.:.:.|.||..|.|.
Human   265 PHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMFD 329

  Fly   366 KDEWVTEVDETNGTYIPETPILTVTVQDEDETNTFQYKVVPNSGFGADKFAMVRNGDGTGSLKII 430
            ..::...|.|....:  |...||||..|           .|||......:.::            
Human   330 PQKYEAHVPENAVGH--EVQRLTVTDLD-----------APNSPAWRATYLIM------------ 369

  Fly   431 QPLDYEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIY 495
                                  .||||                              :|..::.:
Human   370 ----------------------GGDDG------------------------------DHFTITTH 382

  Fly   496 EDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRETQDRHHIQI 560
            .:                                       |::|.::.::.||.|.:::|.:.:
Human   383 PE---------------------------------------SNQGILTTRKGLDFEAKNQHTLYV 408

  Fly   561 LAIDDGSP----ARTATATLTVIVKDVNDNAPTFAQDYKPT-LPENV-SGKKILEVAAKDPDDRL 619
             .:.:.:|    ..|:|||:.|.|:|||: ||.|....|.. :.|.: :|:.:....|:|||   
Human   409 -EVTNEAPFVLKLPTSTATIVVHVEDVNE-APVFVPPSKVVEVQEGIPTGEPVCVYTAEDPD--- 468

  Fly   620 RGNGGPFTFRLDPLASDEIKAGFKVEYDRRG----DNENGVAIISSLRPFDREAQK-----SYAI 675
                           .:..|..:::..|..|    |.::|.  ::::...|||.::     .|.:
Human   469 ---------------KENQKISYRILRDPAGWLAMDPDSGQ--VTAVGTLDREDEQFVRNNIYEV 516

  Fly   676 PIEIKDNGAPAMTGTSTLTVTIGDVNDNKMQPGSKSVLVYNYQGQSQDTPIGRVY-VND------ 733
            .:...|||:|..|||.||.:|:.||||:...|..:.:.:.|      .:|:.:|. :.|      
Human   517 MVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQITICN------QSPVRQVLNITDKDLSPH 575

  Fly   734 --------PDDWDVPDKKYYW--EVQEHQRFKLDTDTGILTMRAGTRRGRYQLRFKVYDREHGQE 788
                    .||.|:     ||  ||.|      :.||.:|:::...::..|.:...:.|  ||.:
Human   576 TSPFQAQLTDDSDI-----YWTAEVNE------EGDTVVLSLKKFLKQDTYDVHLSLSD--HGNK 627

  Fly   789 DIPANLSVTVRDITAEAVQQAGSMRLSHITDEDFVRTWNPVKNQVEP--------SKLERFRNKL 845
            :....:..||.|.........|..:...|.         ||...|..        ..|.|.:.|:
Human   628 EQLTVIRATVCDCHGHVETCPGPWKGGFIL---------PVLGAVLALLFLLLVLLLLVRKKRKI 683

  Fly   846 AE--LLYTD--RDNVDVFSVQ--LKEGSPYPLTDVHFAARSATQQPYFKAVRLNGV------VQM 898
            .|  ||..|  ||||..:..:  .:|...|.:|.:|   |....:|  :.|..|.|      ..|
Human   684 KEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLH---RGLEARP--EVVLRNDVAPTIIPTPM 743

  Fly   899 HR------EEIEKDVGLNITMVNINECL----------HEGKGK--CGSNSCTS 934
            :|      :||...:..|:...|.:...          :||.|.  ...:|.||
Human   744 YRPRPANPDEIGNFIIENLKAANTDPTAPPYDTLLVFDYEGSGSDAASLSSLTS 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadN2NP_609855.3 Cadherin_repeat 41..132 CDD:206637 4/18 (22%)
Cadherin_repeat 140..248 CDD:206637 27/109 (25%)
Cadherin_repeat 256..359 CDD:206637 37/107 (35%)
CA 388..483 CDD:214520 11/94 (12%)
Cadherin_repeat 489..586 CDD:206637 17/100 (17%)
Cadherin_repeat 594..703 CDD:206637 29/119 (24%)
EGF_CA 977..1010 CDD:238011
LamG 1013..1198 CDD:238058
EGF_2 1233..1259 CDD:400365
LamG 1265..1426 CDD:238058
EGF_CA 1497..1535 CDD:238011
CADH_Y-type_LIR 1662..1719 CDD:460041
CDH3NP_001784.2 Cadherin_pro 26..>96 CDD:471661
CA_like 113..211 CDD:481204 30/126 (24%)
Cadherin_repeat 219..324 CDD:206637 38/108 (35%)
Cadherin_repeat 333..436 CDD:206637 31/219 (14%)
Cadherin_repeat 446..544 CDD:206637 28/117 (24%)
CA_like 551..638 CDD:481204 20/105 (19%)
CADH_Y-type_LIR 765..824 CDD:460041 7/33 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.