Sequence 1: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001103206.2 | Gene: | pcdh1g33 / 100003438 | ZFINID: | ZDB-GENE-071004-76 | Length: | 970 | Species: | Danio rerio |
Alignment Length: | 704 | Identity: | 181/704 - (25%) |
---|---|---|---|
Similarity: | 295/704 - (41%) | Gaps: | 104/704 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 192 FDINRTTGDIFVLKPLDRDQ---PNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFP 253
Fly 254 QGIYFGNVTENGTAGSSVMTMSAVDYDDPNESTNAKLIYSIEKN------VIEEETGAPIFEIEP 312
Fly 313 ETGLIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTA--SIRVKDLNDMPPQFTKDEWVTEVDE 375
Fly 376 TNGTYIPETPILTVTVQDEDE--TNTFQYKVVPNSGFGADKFAMVRN----GDGTGSLKIIQPLD 434
Fly 435 YEDPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTK 499
Fly 500 VGTILEQFKATDADQGGHSKVAYKIVRSTNRKRQFAISDRGAVSIQRPLDRETQDRHHIQILAID 564
Fly 565 DGSPARTATATLTVIVKDVNDNAPTFAQD-YKPTLPEN-VSGKKILEVAAKDPDDRLRGNGGPFT 627
Fly 628 FRLDPLASDEIKAGFKVEYDRRGDNENGVAIISSLRPFDREAQKSYAIPIEIKDNGAPAMTGTST 692
Fly 693 LTVTIGDVNDNK---MQPGSKSVLVYNYQGQSQDTPIG----RVYVNDPDD----WDVPDKKYY- 745
Fly 746 -WEVQEHQRFKLDTDTG-ILTMRAGTRRGRYQLRFKVYDREHGQEDIPA-NLSVTVRDITAEAVQ 807
Fly 808 QAGSMRLSHITDEDFVRTWNPVKNQVEPSKLERFRNKLAELLYTDRDNVDVFSV 861 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | |
Cadherin_repeat | 140..248 | CDD:206637 | 13/58 (22%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 29/110 (26%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 30/107 (28%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 27/96 (28%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 27/109 (25%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 19/88 (22%) | ||
EGF_CA | 977..1010 | CDD:238011 | |||
LamG | 1013..1198 | CDD:238058 | |||
EGF_2 | <1233..1259 | CDD:285248 | |||
Laminin_G_2 | 1293..1428 | CDD:280389 | |||
EGF_CA | 1497..1535 | CDD:238011 | |||
Cadherin_C | 1583..1719 | CDD:279398 | |||
pcdh1g33 | NP_001103206.2 | Cadherin_2 | 30..112 | CDD:311943 | 8/36 (22%) |
Cadherin_repeat | 142..238 | CDD:206637 | 29/106 (27%) | ||
Cadherin_repeat | 247..346 | CDD:206637 | 32/117 (27%) | ||
Cadherin_repeat | 359..451 | CDD:206637 | 27/91 (30%) | ||
Cadherin_repeat | 459..561 | CDD:206637 | 27/110 (25%) | ||
Cadherin_repeat | 581..667 | CDD:206637 | 19/93 (20%) | ||
Cadherin_C_2 | 692..>720 | CDD:318652 | 5/17 (29%) | ||
Cadherin_tail | 819..956 | CDD:318236 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |