DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and CELSR1

DIOPT Version :9

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:NP_001365257.1 Gene:CELSR1 / 9620 HGNCID:1850 Length:3019 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
Cadherin_repeat 337..396 CDD:206637
E_set 449..541 CDD:298831
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637
Cadherin_repeat 765..853 CDD:206637
Cadherin_repeat 862..964 CDD:206637
Cadherin_repeat 973..1074 CDD:206637
Cadherin_repeat 1083..1166 CDD:206637
Cadherin_repeat <1219..1298 CDD:206637
Cadherin_repeat 1310..1414 CDD:206637
Cadherin_repeat 1423..1514 CDD:206637
Cadherin_repeat 1522..1630 CDD:206637
Cadherin_repeat 1638..1741 CDD:206637
Cadherin_repeat 1762..1861 CDD:206637
Cadherin_repeat 1871..1966 CDD:206637
Cadherin_repeat 1974..2083 CDD:206637
EGF 2350..2380 CDD:278437
LamG 2385..2570 CDD:238058
EGF_2 <2605..2631 CDD:285248
Laminin_G_2 2665..2800 CDD:280389
EGF_CA 2869..2907 CDD:238011
Cadherin_C 2952..3088 CDD:279398
CELSR1NP_001365257.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..242
Cadherin_repeat 250..349 CDD:206637
Cadherin_repeat 357..455 CDD:206637
Cadherin_repeat 464..561 CDD:206637
Cadherin_repeat 569..683 CDD:206637
Cadherin_repeat 691..785 CDD:206637
Cadherin_repeat 793..888 CDD:206637
Cadherin_repeat 897..995 CDD:206637
Cadherin_repeat 1003..1097 CDD:206637
Cadherin_repeat 1117..1198 CDD:206637
EGF_CA 1364..1399 CDD:238011
EGF_CA 1407..1441 CDD:238011
LamG 1444..1627 CDD:238058
EGF_CA 1651..1685 CDD:238011
Laminin_G_2 1719..1849 CDD:396680
EGF_CA 1874..1908 CDD:238011
TNFRSF 1881..2011 CDD:419870
EGF_Lam 2002..>2040 CDD:238012
HormR 2052..2113 CDD:214468
GAIN 2130..2381 CDD:406802
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2291..2328
GPS 2407..2460 CDD:197639
7tm_GPCRs 2465..2718 CDD:421689
TM helix 1 2467..2492 CDD:410628
TM helix 2 2501..2523 CDD:410628
TM helix 3 2532..2559 CDD:410628
TM helix 4 2571..2591 CDD:410628
TM helix 5 2608..2637 CDD:410628
TM helix 6 2649..2676 CDD:410628
TM helix 7 2680..2705 CDD:410628
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2777..2939
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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