Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445844.1 | Gene: | Cdh11 / 84407 | RGDID: | 619742 | Length: | 796 | Species: | Rattus norvegicus |
Alignment Length: | 1593 | Identity: | 284/1593 - (17%) |
---|---|---|---|
Similarity: | 397/1593 - (24%) | Gaps: | 932/1593 - (58%) |
- Green bases have known domain annotations that are detailed below.
Fly 1542 VTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFA 1606
Fly 1607 QD-EGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNA 1670
Fly 1671 RLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDYSIQVVAMD----GGGLKGTGT 1731
Fly 1732 ASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPILTVTVHDED--ETNKFQYKVIDNSGYGA 1794
Fly 1795 DKF---TMVRNNDGTGSLKIVQPLDYE-----------------DQLQSNG-FRFRIQVNDKGED 1838
Fly 1839 NDNDKYHVAYSWVVVKLRDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVSYS 1903
Fly 1904 IDRSSDRQRQFAIN-QNGSVTIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQDINDNA 1967
Fly 1968 PKFLKDYRPVLPE--HVPP---RKVVEILATDDDDRSKSNGPPFQFRLDPSADDIIRASFKVEQD 2027
Fly 2028 QKGANGDGMAVISSLR-SFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNKMQPGSKD 2091
Fly 2092 IFVYNYQGQSPDTPIGRVYVYDLDDWDLPDKKFYWEAMEHPRFKLDEDSGMVTMRAGTREGRYHL 2156
Fly 2157 RFKVYDRKHTQTDIPANVTVTVREIPHEAVVNSGSVRLSGISDEDFIRVWNYRTQSMSRSKMDRF 2221
Fly 2222 RDKLADLLNTERENVDIFSVQLKRKHPPLTDVRFSAHGSPYYKPVRLNGIVLMHREEIEKDVGIN 2286
Fly 2287 ITMVGIDECLYENQMCEGSCTNSLEISPLPYMVNANKTALVGVRVDTIADCTCGARNFTKPESCR 2351
Fly 2352 TTPCHNGGRCVDTRFGPHCSCPVGYTGPRCQQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKP 2416
Fly 2417 DGLIIYNGPIVPPERDETLISDFIALELERGYPRLLIDFGSGTLELRVKTKKTLDDGEWHRIDLF 2481
Fly 2482 WDTESIRMVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNAPLQVGGLYREQFDQ 2546
Fly 2547 SLYFWHYMPTAKGFDGCIRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEVCAQTETTARCWEHGNC 2611
Fly 2612 VGSLSEARCHCRPGWTGPACNIPTIPTTFKAQSYVKYALSFEPDRFSTQVQLRFRTREEYGELFR 2676
Fly 2677 VSDQHNREYGILEIKDGHLHFRYNLNSLRTEEKDLWLNAIVVNDGQWHVVKVNRYGSAATLELDG 2741
Fly 2742 GEGRRYNETFEFVGHQWLLVDKQEGVYAGGKAEYTGVRTFEVYADYQKSCLDDIRLEGKHLPLPP 2806
Fly 2807 AMNGTQWGQATMARNLEKGCPSNKPCSNVICPDPFECVDLWNVYECTCGEGRIMSPDSKGCMDRN 2871
Fly 2872 ECLDMPCMNGATCINLEPRLRYRCICPDGFWGENCELVQEGQTLKLSMGALAAILVCLLIILILV 2936
Fly 2937 LVFVVYNR-RREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIP--IGGPMP----- 2993
Fly 2994 PELAPMKMPIMYPVMTLMPGQEPN---VGMFIEEHKKRADGDPNAPPFDDLRNYAYEGGGSTAGS 3055
Fly 3056 LSSLASGTDDEQQEYDYLGAWGPRFDKLANMYG 3088 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
Cadherin_repeat | 337..396 | CDD:206637 | |||
E_set | 449..541 | CDD:298831 | |||
Cadherin_repeat | 549..>625 | CDD:206637 | |||
Cadherin_repeat | 655..752 | CDD:206637 | |||
Cadherin_repeat | 765..853 | CDD:206637 | |||
Cadherin_repeat | 862..964 | CDD:206637 | |||
Cadherin_repeat | 973..1074 | CDD:206637 | |||
Cadherin_repeat | 1083..1166 | CDD:206637 | |||
Cadherin_repeat | <1219..1298 | CDD:206637 | |||
Cadherin_repeat | 1310..1414 | CDD:206637 | |||
Cadherin_repeat | 1423..1514 | CDD:206637 | |||
Cadherin_repeat | 1522..1630 | CDD:206637 | 26/88 (30%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 41/106 (39%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 28/121 (23%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 29/95 (31%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 39/114 (34%) | ||
EGF | 2350..2380 | CDD:278437 | 3/29 (10%) | ||
LamG | 2385..2570 | CDD:238058 | 2/184 (1%) | ||
EGF_2 | <2605..2631 | CDD:285248 | 0/25 (0%) | ||
Laminin_G_2 | 2665..2800 | CDD:280389 | 3/134 (2%) | ||
EGF_CA | 2869..2907 | CDD:238011 | 0/37 (0%) | ||
Cadherin_C | 2952..3088 | CDD:279398 | 72/145 (50%) | ||
Cdh11 | NP_445844.1 | CA | 79..157 | CDD:214520 | 28/90 (31%) |
Cadherin_repeat | 163..264 | CDD:206637 | 42/107 (39%) | ||
Cadherin_repeat | 272..379 | CDD:206637 | 27/113 (24%) | ||
Cadherin_repeat | 387..484 | CDD:206637 | 31/117 (26%) | ||
CA | 514..598 | CDD:214520 | 37/432 (9%) | ||
Cadherin_C | 649..787 | CDD:279398 | 73/147 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 130 | 1.000 | Domainoid score | I5067 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |