Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112623.2 | Gene: | Cdh2 / 83501 | RGDID: | 69280 | Length: | 906 | Species: | Rattus norvegicus |
Alignment Length: | 1742 | Identity: | 299/1742 - (17%) |
---|---|---|---|
Similarity: | 462/1742 - (26%) | Gaps: | 946/1742 - (54%) |
- Green bases have known domain annotations that are detailed below.
Fly 1418 FDKSLYEAEVDENEDIQHTVLTVTAKDHDESSRIRYEITS------GNIGGAFAVKNM----TGA 1472
Fly 1473 IYVAGALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITE-------- 1529
Fly 1530 ------------EDDRN-LPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTG 1581
Fly 1582 EIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTEN 1646
Fly 1647 GTAGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSP-IFEIEPDTGVIKTAVCCLDRER 1710
Fly 1711 TPDYS--IQVVAMDGG---GLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPILT 1770
Fly 1771 VTVHDEDETNKFQ--YKVIDNSGYGADKFTMVRN-NDGTGSLKIVQPLDYEDQLQSNGFRFRIQV 1832
Fly 1833 NDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGGK 1897
Fly 1898 SKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQD 1962
Fly 1963 INDNA-----PKFLKDYRPVLPEHVPPRKVVEILATDDDDR--------SKSNGPPFQFRLDPSA 2014
Fly 2015 DDIIRASFKVEQDQKGANGDGMAVISSLRSFDRE----QQKEYMIPIVIKDHGSPAMTGTSTLTV 2075
Fly 2076 IIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDDWDLPDKKFYWEAMEHPRFKLDEDS 2140
Fly 2141 GMVTMRAGTREGRYHLRFKVYDRKHTQTDIPANVTVTVREIPHEAVVNSGSVRLSGISDEDFIRV 2205
Fly 2206 WNYRTQSMSRSKMDRFRDKLADLLNTERENVDIFSVQLKRKHPPLTDVRFSAHGSPYYKPVRLNG 2270
Fly 2271 IVLMHREEIEKDVGINITMVGIDECLYENQMCEGSCTNSLEISPLPYMVNANKTALVGVRVDTIA 2335
Fly 2336 DCTCGARNFTKPESCRTTPCHNGGRCVDTRFGPHCSCPVGYTGPRCQQTTRSFRGNGWAWYPPLE 2400
Fly 2401 MCDESHLSLEFITRKPDGLIIYNGPIVPPERDETLISDFIALELERGYPRLLIDFGSGTLELRVK 2465
Fly 2466 TKKTLDDGEWHRIDLFWDTESIRMVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNV 2530
Fly 2531 NAPLQVGGLYREQFDQSLYFWHYMPTAKGFDGCIRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEV 2595
Fly 2596 CAQTETTARCWEHGNCVGSLSEARCHCRPGWTGPACNIPTIPTTFKAQSYVKYALSFEPDRFSTQ 2660
Fly 2661 VQLRFRTREEYGELFRVSDQHNREYGILEIKDGHLHFRYNLNSLRTEEKDLWLNAIVVNDGQWHV 2725
Fly 2726 VKVNRYGSAATLELDGGEGRRYNETFEFVGHQWLLVDKQEGVYAGGKAEYTGVRTFEVYADYQKS 2790
Fly 2791 CLDDIRLEGKHLPLPPAMNGTQWGQATMARNLEKGCPSNKPCSNVICPDPFECVDLWNVYECTCG 2855
Fly 2856 EGRIMSPDSKGCMDRNECLDMPCMNGATCINLEPRLRYRCICPDGFWGENCELVQEGQTLKLSMG 2920
Fly 2921 ALAAILVCLLIILILVLVFVVYNRR----REAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDI 2981
Fly 2982 TPLQIPIGGPMPPELAPM------KMPI----MYPVMTLMPGQEPNVGMFIEEHKKRADGDPNAP 3036
Fly 3037 PFDDLRNYAYEGGGSTAGSLSSLASGTDDEQQEYDYLGAWGPRFDKLANMYG 3088 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
Cadherin_repeat | 337..396 | CDD:206637 | |||
E_set | 449..541 | CDD:298831 | |||
Cadherin_repeat | 549..>625 | CDD:206637 | |||
Cadherin_repeat | 655..752 | CDD:206637 | |||
Cadherin_repeat | 765..853 | CDD:206637 | |||
Cadherin_repeat | 862..964 | CDD:206637 | |||
Cadherin_repeat | 973..1074 | CDD:206637 | |||
Cadherin_repeat | 1083..1166 | CDD:206637 | |||
Cadherin_repeat | <1219..1298 | CDD:206637 | |||
Cadherin_repeat | 1310..1414 | CDD:206637 | |||
Cadherin_repeat | 1423..1514 | CDD:206637 | 17/100 (17%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 29/128 (23%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 45/108 (42%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 15/101 (15%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 14/94 (15%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 26/120 (22%) | ||
EGF | 2350..2380 | CDD:278437 | 0/29 (0%) | ||
LamG | 2385..2570 | CDD:238058 | 2/184 (1%) | ||
EGF_2 | <2605..2631 | CDD:285248 | 0/25 (0%) | ||
Laminin_G_2 | 2665..2800 | CDD:280389 | 7/134 (5%) | ||
EGF_CA | 2869..2907 | CDD:238011 | 4/37 (11%) | ||
Cadherin_C | 2952..3088 | CDD:279398 | 69/145 (48%) | ||
Cdh2 | NP_112623.2 | Cadherin_pro | 31..121 | CDD:400897 | 16/86 (19%) |
CA_like | 163..263 | CDD:421687 | 28/107 (26%) | ||
Cadherin_repeat | 273..378 | CDD:206637 | 45/107 (42%) | ||
Cadherin_repeat | 386..494 | CDD:206637 | 32/218 (15%) | ||
Cadherin_repeat | 508..601 | CDD:206637 | 26/114 (23%) | ||
Cadherin | 608..701 | CDD:421759 | 31/668 (5%) | ||
Cadherin_C | 751..904 | CDD:395833 | 73/155 (47%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 863..883 | 11/19 (58%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 130 | 1.000 | Domainoid score | I5067 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |