Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335179.1 | Gene: | si:dkey-88l16.3 / 796880 | ZFINID: | ZDB-GENE-030131-6015 | Length: | 2335 | Species: | Danio rerio |
Alignment Length: | 749 | Identity: | 132/749 - (17%) |
---|---|---|---|
Similarity: | 203/749 - (27%) | Gaps: | 281/749 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 2294 ECLYENQMCEG--SCTNSLEISPLPYMVNANKTALVGVRVDTIADCTCGARN-----------FT 2345
Fly 2346 KPESCRTTPCHNGGRCVDTRF--GPHCSCPVGYTGPRCQQTTRSFR--------GNGWAWYPPLE 2400
Fly 2401 MCDESHLSLEFITRK--PDGLIIYNGPIVPPERDETLI-------SDFIALEL------------ 2444
Fly 2445 ---------ERGYP-RLLIDFGSGTLELRVKTKKTLD-----------DGEWHRIDLFWDTESIR 2488
Fly 2489 MVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNAPLQVGGLYREQFDQSLYFWHY 2553
Fly 2554 MPTAKGFDGCIRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEVCA-QTETTARCWEHG-------N 2610
Fly 2611 CVGSLSEARCHCRPGWTGPACNIPTIPTTFKAQSYVKYALSFEPDRFSTQVQLRFRTREEYGELF 2675
Fly 2676 RVSDQHNREYGILEIKDGHLHFRYNLNSLRTEEKDLWLNAIVVNDGQWHVVKVNRYGSAATLELD 2740
Fly 2741 GGEGRRYNETFEFVGHQWLLVDKQEGVYAGGKAEYTGVRTFEVYADYQKSCL-DDIRLEGKHLPL 2804
Fly 2805 PPAMNGTQ-----WGQATMARNLEKGCP-SNKPCS--------NVICPDPFECVDLWNVYEC--T 2853
Fly 2854 CGEGRIMSPDSKGCMDRN-------ECLDMPCMNGATCINLEPRLRY------RCI--------- 2896
Fly 2897 --CPDGFWGENCEL---------VQEGQTLKLSM 2919 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
Cadherin_repeat | 337..396 | CDD:206637 | |||
E_set | 449..541 | CDD:298831 | |||
Cadherin_repeat | 549..>625 | CDD:206637 | |||
Cadherin_repeat | 655..752 | CDD:206637 | |||
Cadherin_repeat | 765..853 | CDD:206637 | |||
Cadherin_repeat | 862..964 | CDD:206637 | |||
Cadherin_repeat | 973..1074 | CDD:206637 | |||
Cadherin_repeat | 1083..1166 | CDD:206637 | |||
Cadherin_repeat | <1219..1298 | CDD:206637 | |||
Cadherin_repeat | 1310..1414 | CDD:206637 | |||
Cadherin_repeat | 1423..1514 | CDD:206637 | |||
Cadherin_repeat | 1522..1630 | CDD:206637 | |||
Cadherin_repeat | 1638..1741 | CDD:206637 | |||
Cadherin_repeat | 1762..1861 | CDD:206637 | |||
Cadherin_repeat | 1871..1966 | CDD:206637 | |||
Cadherin_repeat | 1974..2083 | CDD:206637 | |||
EGF | 2350..2380 | CDD:278437 | 8/31 (26%) | ||
LamG | 2385..2570 | CDD:238058 | 37/234 (16%) | ||
EGF_2 | <2605..2631 | CDD:285248 | 6/32 (19%) | ||
Laminin_G_2 | 2665..2800 | CDD:280389 | 19/135 (14%) | ||
EGF_CA | 2869..2907 | CDD:238011 | 13/61 (21%) | ||
Cadherin_C | 2952..3088 | CDD:279398 | |||
si:dkey-88l16.3 | XP_021335179.1 | LDLa | 17..52 | CDD:238060 | |
LDLa | 56..91 | CDD:238060 | |||
LDLa | 100..130 | CDD:238060 | |||
LDLa | <170..192 | CDD:238060 | |||
LDLa | 199..232 | CDD:238060 | |||
LDLa | 246..281 | CDD:238060 | |||
LDLa | 285..320 | CDD:238060 | |||
LDLa | <334..359 | CDD:238060 | |||
LDLa | 369..404 | CDD:238060 | |||
LDLa | 411..444 | CDD:238060 | |||
LDLa | 453..488 | CDD:238060 | |||
LDLa | 492..527 | CDD:238060 | |||
LDLa | 575..610 | CDD:238060 | |||
LDLa | 620..650 | CDD:238060 | |||
LDLa | 665..700 | CDD:238060 | 5/22 (23%) | ||
LDLa | 704..739 | CDD:238060 | 4/34 (12%) | ||
LDLa | 748..778 | CDD:238060 | 7/29 (24%) | ||
LDLa | 787..822 | CDD:238060 | 12/55 (22%) | ||
LDLa | 829..862 | CDD:238060 | 3/32 (9%) | ||
LDLa | 877..912 | CDD:238060 | 10/63 (16%) | ||
LDLa | 916..951 | CDD:238060 | 6/69 (9%) | ||
LDLa | 959..990 | CDD:238060 | 7/30 (23%) | ||
LDLa | 1048..1082 | CDD:238060 | 13/85 (15%) | ||
LDLa | <1095..1117 | CDD:238060 | 7/25 (28%) | ||
LDLa | 1132..1167 | CDD:238060 | 8/34 (24%) | ||
LDLa | 1171..1206 | CDD:238060 | 7/36 (19%) | ||
LDLa | 1215..1245 | CDD:238060 | 5/29 (17%) | ||
LDLa | 1250..1284 | CDD:238060 | 4/18 (22%) | ||
LDLa | 1290..1324 | CDD:238060 | |||
LDLa | 1331..1366 | CDD:238060 | |||
LDLa | 1371..1402 | CDD:238060 | |||
cEGF | 1453..1474 | CDD:315355 | |||
EGF_CA | 1471..1512 | CDD:214542 | |||
LY | <1593..1620 | CDD:214531 | |||
Ldl_recept_b | 1650..1688 | CDD:278487 | |||
LY | 1672..1713 | CDD:214531 | |||
LY | 1721..1756 | CDD:214531 | |||
LY | <2004..2036 | CDD:214531 | |||
FXa_inhibition | 2105..2139 | CDD:317114 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |