| Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038968743.1 | Gene: | Nrxn1 / 60391 | RGDID: | 628659 | Length: | 1516 | Species: | Rattus norvegicus |
| Alignment Length: | 1688 | Identity: | 344/1688 - (20%) |
|---|---|---|---|
| Similarity: | 538/1688 - (31%) | Gaps: | 597/1688 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1596 GRPQWRFTVFAQDEGGEGLVGYADVQVN-----------------------------LKDINDNA 1631
Fly 1632 PIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEG---------SNARLVYSIEKNVIEEET-- 1685
Fly 1686 --GSPIFEI--EPDTGV-IKTAVCCL-------DRERT---------PDYSIQVVAM----DGGG 1725
Fly 1726 LKGTGTASIRVK-------DINDMPPQFTKDEWFTEVDETDGTALPEMPILTVTVHDEDETNKFQ 1783
Fly 1784 YKVID------NSGYGADKFTMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQ-VNDKGEDNDN 1841
Fly 1842 DKYHVAYSWVVVKLRDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVSYSIDR 1906
Fly 1907 SSDRQRQFAINQNGSVTIQRSLDREVVPRHQVKILAIDD-----GSPPKTATATLTVIVQDINDN 1966
Fly 1967 APKFLKDYRPVLPEHVPPRKVVEILATDDDDRSKSNG------------PPFQFRLDPSADDIIR 2019
Fly 2020 ASFK----VEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIK-----------------DHG 2063
Fly 2064 SPAMTGTSTLTVIIGDVNDNK------MQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDD----WD 2118
Fly 2119 LPDKKF-------YWEAMEHPRFK-------LDEDSGMVTMRAGTREGRYHLRFKVYDRKHTQTD 2169
Fly 2170 IPANVTVTVREIPHEAVVNSGSVRLSGISDEDFIRVWN----------YRTQSMSRSKMDRFRD- 2223
Fly 2224 ------KLADLLNTERENVDIFSVQLKRKHPPLTDVRFSAHGSPYYKPVRLNGIVLMHRE----- 2277
Fly 2278 --EIEKDVG-INITMVGIDECLYENQMCEGSCTNSLEISPLPYMVNANKTALVGVRV-------- 2331
Fly 2332 ----DTIADCTCGARNFTKPESCRTTPCHN--GGRCVDTRFGPHCSCPVGYTGPRCQQTTRSFRG 2390
Fly 2391 NGWAWYPPLEMCDES-----------------------------------------HLSLEFITR 2414
Fly 2415 KPDGLIIYN---GPIVPPERDETLISDFIALELERGYPRLLIDFGSGTLELRVKTKKTLDDGEWH 2476
Fly 2477 RIDLFWDTESIRMVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNAPLQVGGLYR 2541
Fly 2542 EQFDQSLYFWHYMPTAKGFDGCIRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEVCAQT------- 2599
Fly 2600 --ETTAR---CWEHGNCVGSLSEARCHC-RPGWTGPACNIPTIPTTFK---AQSYVKYALSFEPD 2655
Fly 2656 RFSTQVQLRFRTREEYGELFRV-SDQHNREYGILEIKDGHLHFRYNL--NSLRTEEKDLWLNAIV 2717
Fly 2718 VNDGQWHVVKVNRYGSAATLELDG-------GEGRRYNETFEF-----------VGHQWLLVDK- 2763
Fly 2764 --------QEGVYAGGKAE------------YTGVRTFEVYA--DYQKSCLDDIRLEGKHLPLPP 2806
Fly 2807 AMNGTQWGQA--------------TMARN-LEKGCPSNK-PCSNVI---------CPDPFECVDL 2846
Fly 2847 WNVYECTCGEGRIMSPDSKGCMDRNECLDMPCMNGATCINLEPRLRYRCICPDGFWGENCELVQE 2911
Fly 2912 -GQTLKLSMGALAAILVCLLIILILVLVFVVYNRRREA--HIKYPGPDDDVRENIINYDDEGG 2971 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
| Cadherin_repeat | 337..396 | CDD:206637 | |||
| E_set | 449..541 | CDD:298831 | |||
| Cadherin_repeat | 549..>625 | CDD:206637 | |||
| Cadherin_repeat | 655..752 | CDD:206637 | |||
| Cadherin_repeat | 765..853 | CDD:206637 | |||
| Cadherin_repeat | 862..964 | CDD:206637 | |||
| Cadherin_repeat | 973..1074 | CDD:206637 | |||
| Cadherin_repeat | 1083..1166 | CDD:206637 | |||
| Cadherin_repeat | <1219..1298 | CDD:206637 | |||
| Cadherin_repeat | 1310..1414 | CDD:206637 | |||
| Cadherin_repeat | 1423..1514 | CDD:206637 | |||
| Cadherin_repeat | 1522..1630 | CDD:206637 | 11/62 (18%) | ||
| Cadherin_repeat | 1638..1741 | CDD:206637 | 33/145 (23%) | ||
| Cadherin_repeat | 1762..1861 | CDD:206637 | 19/105 (18%) | ||
| Cadherin_repeat | 1871..1966 | CDD:206637 | 19/99 (19%) | ||
| Cadherin_repeat | 1974..2083 | CDD:206637 | 26/141 (18%) | ||
| EGF | 2350..2380 | CDD:278437 | 7/31 (23%) | ||
| LamG | 2385..2570 | CDD:238058 | 46/228 (20%) | ||
| EGF_2 | <2605..2631 | CDD:285248 | 7/26 (27%) | ||
| Laminin_G_2 | 2665..2800 | CDD:280389 | 47/178 (26%) | ||
| EGF_CA | 2869..2907 | CDD:238011 | 2/37 (5%) | ||
| Cadherin_C | 2952..3088 | CDD:279398 | 5/20 (25%) | ||
| Nrxn1 | XP_038968743.1 | LamG | 30..190 | CDD:238058 | 19/107 (18%) |
| LamG | 307..446 | CDD:214598 | 42/243 (17%) | ||
| LamG | 503..652 | CDD:214598 | 31/156 (20%) | ||
| EGF_CA | 680..713 | CDD:238011 | 8/42 (19%) | ||
| LamG | 741..877 | CDD:214598 | 36/179 (20%) | ||
| Laminin_G_2 | 933..1061 | CDD:396680 | 40/163 (25%) | ||
| LamG | 1134..>1253 | CDD:238058 | 33/123 (27%) | ||
| Syndecan | 1441..>1476 | CDD:395821 | 12/43 (28%) | ||
| 4.1m | 1461..1479 | CDD:128590 | 5/23 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||