DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and LOC5666925

DIOPT Version :10

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:XP_061508255.1 Gene:LOC5666925 / 5666925 VectorBaseID:AGAMI1_010187 Length:1143 Species:Anopheles gambiae


Alignment Length:1488 Identity:396/1488 - (26%)
Similarity:596/1488 - (40%) Gaps:469/1488 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1155 LRVSASDKGTPASAADVDVELDVVDRNNKPPIWDKSIYGPIHIRENVTV-GTVVTSVKASSGIEG 1218
            :.|.|::......||:..:.|.|  .:|..|.:.|....||.:.|...: .|.:..::|::.:..
Mosquito    17 INVHAANIQAKNEAANDTISLTV--DSNYIPSFTKIPSAPIALNETYDLFNTAIAELEANTNLND 79

  Fly  1219 NPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYESIKEYNLTIRVENNGAQQL 1283
            ..::.:.|...:.|.:|..:||.|:|    .:..|.||:...||||.::||.:|:|..|  .:.|
Mosquito    80 GTSIIFDLALDNDATSNIQNTFILEQ----VNNTAYIKLGGKLDYEKVQEYRITVRAMN--VKGL 138

  Fly  1284 ASEATVYIMLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAIDKDGTFPNNQVYYYIVDSPRN 1348
            .:||.|.|.:.|.||.||.........:||.||.||.|.||.|.|.|||..:|.|.|      |.
Mosquito   139 KAEAVVLIKILDENDNIPEIIGDWNGVILEHEPAGTFVMQVKAHDNDGTSAHNIVSY------RL 197

  Fly  1349 EG--KEFFEINLQSGEIFTKTVFDREKKGAYALEVEARDGAPSARPNSNGPNSVTKFIRIGIADK 1411
            ||  :::|.|:.::|.|.:...||||.|..|.:.|.|.|.:||...|:..|||..|.:.|.:.||
Mosquito   198 EGTARQYFHIDSKTGNITSLVEFDREAKDIYPVTVVAEDNSPSVLFNNGKPNSAVKQLFIRVLDK 262

  Fly  1412 NDNPPYFDKSLYEAE-VDENEDIQHTVLTVTAKDHDESSRIRYEITSGNIGGAFAVKNMTGAIYV 1475
            ||:||.||:..||.: :.|:.||..:|:.|.|.|.|:..:|:|.|...|||.|:.:...||.|.|
Mosquito   263 NDHPPQFDEQYYEVDSIPEDADINTSVIKVKATDLDKDPKIKYSIIENNIGKAYKIDEDTGLISV 327

  Fly  1476 AGALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVL 1540
            ...||||:.:.|:|.:.|.|.|.::.|.|.|.:|::||                           
Mosquito   328 NKKLDYESIQEYDLVVQAHDGLFKSTTNVRIQIKNLND--------------------------- 365

  Fly  1541 QVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVF 1605
                                                                             
Mosquito   366 ----------------------------------------------------------------- 365

  Fly  1606 AQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNA 1670
                                       |.||                ::|:|.|           
Mosquito   366 ---------------------------IAPQ----------------ILTLTNV----------- 376

  Fly  1671 RLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIR 1735
                :|::|.|..:..:.::..:||          ::....|. :||.                 
Mosquito   377 ----TIKENTIPSDCIANLWAYDPD----------IENFEYPQ-NIQY----------------- 409

  Fly  1736 VKDINDMPPQFTKDEWFTEVDETDGTALPE--MPILTVTVHDEDETNKFQYKVIDNSGYGADKFT 1798
                                      |||:  ..:|::                           
Mosquito   410 --------------------------ALPKEHQHLLSI--------------------------- 421

  Fly  1799 MVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKP 1863
                 |..|.||::||||                                       ||    .|
Mosquito   422 -----DDKGCLKLLQPLD---------------------------------------RD----PP 438

  Fly  1864 HFERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSL 1928
            |                |.|:.:...|..|:.||.                              
Mosquito   439 H----------------GHEVLQIDITITDENGKG------------------------------ 457

  Fly  1929 DREVVPRHQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPPRKVVEILAT 1993
                                 :||..|:.:.|:|||||||:.......|..|:.|...:.::.|.
Mosquito   458 ---------------------RTAMETVYIFVEDINDNAPQLTNRMPVVWSENRPSAMITKLTAE 501

  Fly  1994 DDDDRSKSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIV 2058
            |.|  .:.|||||.:.:||.|...|:..|:...|:          :.||..|||||||:|::||:
Mosquito   502 DAD--GEHNGPPFFYSVDPDAPTEIKNRFQTVGDE----------LYSLVEFDREQQKQYLVPIL 554

  Fly  2059 IKDHGSPAMTGTSTLTVIIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDDWDLPDKK 2123
            |:|.|...|:..|.|.|:|||.|||:||.|...|.|.||:|:..||.||.|||.|.||||:.||.
Mosquito   555 IRDSGHKPMSAVSKLLVVIGDKNDNEMQMGQSHILVNNYEGKLADTQIGLVYVSDPDDWDVSDKM 619

  Fly  2124 FYWEAM----EHPRFKLDEDSGMVTMRAGTREGRYHLRFKV-----YDRKHTQTDIPANVTVTVR 2179
            |.|:.|    ....|||:.::|::|||.||.||.|:|.|.|     |..:|   ::.|.|||||:
Mosquito   620 FLWDEMTPETNRKLFKLNINTGIITMRKGTPEGIYNLEFTVIEESSYFPRH---NVSARVTVTVK 681

  Fly  2180 EIPHEAVVNSGSVRLSGISDEDFIRVWNYRTQSMSRSKMDRFRDKLADLLNTERENVDIFSVQLK 2244
            .|..:.|..|||||...::.|.||.    :|.....:.|.|.:..:|.:|:|..:.||||::. .
Mosquito   682 NITAKTVNQSGSVRFYNVTAETFIS----QTLGELNTPMYRLQQSIASILDTSPDQVDIFTIN-N 741

  Fly  2245 RK--HPPLTDVRFSAHGSPYYKPVRLNGIVLMHREEIEKDVGINITMVGIDECLYENQMCEGSCT 2307
            ||  .....||.|:...:.|.....||.::.:|..::|:|||..|.||||||||.:...|..:|.
Mosquito   742 RKLVRGAFLDVFFAVDDTIYTSSEVLNAVLSLHLRQLEEDVGYRIVMVGIDECLEKGHTCTQTCK 806

  Fly  2308 NSLEISPLPYMVNANKTALVGVRVDTIADCTCGARNFTKPE-SCRTTPCHNGGRCVDTRFGPHCS 2371
            |.:..:..|.:|:.|.|:.||:.....|:|.        |: ......|.|||    |.....|.
Mosquito   807 NKVLKTAKPIVVHTNTTSFVGMTTLVQAECI--------PQIESSLVACFNGG----TFQNGKCK 859

  Fly  2372 CPVGYTGPRCQQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKPDGLIIYNGPI-------VPP 2429
            ||:|:.||:|::....|.|.|:|.||.:...:.:::|:|.:.|:.|||::|.||:       .||
Mosquito   860 CPMGFEGPQCEKLDICFDGIGYAIYPSINSGNINNVSIELLPRQKDGLVLYMGPLKYGPSLKTPP 924

  Fly  2430 ERDETLISDFIALELERGYPRLLIDFGSGT---------LELRVKTKKTLDDGEWHRIDLFWDTE 2485
                     |:|||:..|...||:|:|:||         |...:|.:..|..   :||::  .|.
Mosquito   925 ---------FLALEINDGMLVLLLDYGTGTSRFEHQQIILHEIIKVQVILQP---YRIEI--KTV 975

  Fly  2486 SIRMVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNAPLQVGGLYREQFDQ--SL 2548
            :.:||                       |.::..:...:|.:|..|..||: |:.....|:  ||
Mosquito   976 NNKMV-----------------------SSRSHYENKDWNGFLLGNVSLQL-GVSSISLDKLGSL 1016

  Fly  2549 YFWHYMPTAKGFDGCIRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEVCAQTETTARCW 2606
            |.|.|:|..|.||||:|||..|.:..|........|.:.   .::...|..|.|...|
Mosquito  1017 YSWKYVPFTKSFDGCLRNLTINGRTIDFTQTSHKHNVLF---NSQGFTAIVEQTFLVW 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
CA_like 449..541 CDD:481204
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637
Cadherin_repeat 765..853 CDD:206637
Cadherin_repeat 862..964 CDD:206637
Cadherin_repeat 973..1074 CDD:206637
Cadherin_repeat 1083..1166 CDD:206637 2/10 (20%)
Cadherin_repeat <1219..1298 CDD:206637 25/78 (32%)
Cadherin_repeat 1310..1414 CDD:206637 44/105 (42%)
Cadherin_repeat 1423..1514 CDD:206637 35/91 (38%)
Cadherin_repeat 1522..1630 CDD:206637 0/107 (0%)
Cadherin_repeat 1638..1741 CDD:206637 11/102 (11%)
CA 1770..1863 CDD:214520 10/92 (11%)
Cadherin_repeat 1871..1966 CDD:206637 13/94 (14%)
Cadherin_repeat 1974..2083 CDD:206637 40/108 (37%)
EGF 2350..2380 CDD:394967 10/29 (34%)
LamG 2385..2570 CDD:238058 58/202 (29%)
EGF_2 2605..2631 CDD:400365 1/2 (50%)
LamG 2637..2797 CDD:238058
EGF_CA 2869..2907 CDD:238011
CADH_Y-type_LIR 3029..3088 CDD:460041
LOC5666925XP_061508255.1 None
Blue background indicates that the domain is not in the aligned region.

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