DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and Celsr2

DIOPT Version :9

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:NP_059088.2 Gene:Celsr2 / 53883 MGIID:1858235 Length:2919 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
Cadherin_repeat 337..396 CDD:206637
E_set 449..541 CDD:298831
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637
Cadherin_repeat 765..853 CDD:206637
Cadherin_repeat 862..964 CDD:206637
Cadherin_repeat 973..1074 CDD:206637
Cadherin_repeat 1083..1166 CDD:206637
Cadherin_repeat <1219..1298 CDD:206637
Cadherin_repeat 1310..1414 CDD:206637
Cadherin_repeat 1423..1514 CDD:206637
Cadherin_repeat 1522..1630 CDD:206637
Cadherin_repeat 1638..1741 CDD:206637
Cadherin_repeat 1762..1861 CDD:206637
Cadherin_repeat 1871..1966 CDD:206637
Cadherin_repeat 1974..2083 CDD:206637
EGF 2350..2380 CDD:278437
LamG 2385..2570 CDD:238058
EGF_2 <2605..2631 CDD:285248
Laminin_G_2 2665..2800 CDD:280389
EGF_CA 2869..2907 CDD:238011
Cadherin_C 2952..3088 CDD:279398
Celsr2NP_059088.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..194
Cadherin_repeat 185..285 CDD:206637
Cadherin_repeat 293..395 CDD:206637
Cadherin_repeat 404..501 CDD:206637
Cadherin_repeat 509..606 CDD:206637
Cadherin_repeat 614..708 CDD:206637
Cadherin_repeat 716..811 CDD:206637
Cadherin_repeat 819..917 CDD:206637
Cadherin_repeat 925..1019 CDD:206637
Cadherin_repeat 1042..1120 CDD:206637
EGF_CA 1289..1324 CDD:238011
EGF_CA 1333..1366 CDD:238011
LamG 1369..1552 CDD:238058
EGF_CA 1578..1609 CDD:238011
LamG 1618..1767 CDD:238058
EGF_CA 1795..1829 CDD:238011
EGF_CA 1826..1867 CDD:238011
Laminin_EGF <1850..1889 CDD:333801
EGF_Lam 1924..1969 CDD:214543
HormR 1972..2034 CDD:214468
GAIN 2051..2289 CDD:339749
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2216..2241
GPS 2315..2368 CDD:197639
7tm_GPCRs 2373..2626 CDD:355774
TM helix 1 2376..2400 CDD:341315
TM helix 2 2409..2430 CDD:341315
TM helix 3 2440..2462 CDD:341315
TM helix 4 2481..2497 CDD:341315
TM helix 5 2516..2539 CDD:341315
TM helix 6 2559..2584 CDD:341315
TM helix 7 2588..2613 CDD:341315
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2690..2884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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