DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CadN and Cad89D

DIOPT Version :10

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster


Alignment Length:1920 Identity:428/1920 - (22%)
Similarity:712/1920 - (37%) Gaps:493/1920 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 ENQKKDSDIISIKAKSFADREIRYTLKAQGQGAG----TFNI---GPTSGIVKLAKEL----DFE 715
            |:.:...:|:.::|..      |.|...:|..|.    .||:   ..|:.:|.||:.|    |.:
  Fly    80 EDAQVGKEILRLQAYP------RSTAALKGADASGDHKYFNLTEHNATTLVVSLARSLERLVDRD 138

  Fly   716 DLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILR-V 779
            ..|....:.::....::.....:.:.:|:.:.|||||||:|....|.. :|||:..:.:.|.. |
  Fly   139 VPRNLLKFRILCAGKQEKLEEGSYLSITVYIEDVNDNAPEFLNVPYVV-DVDENTSIESIIFEGV 202

  Fly   780 KAMDSDSGS--NAEIEYLVS----------DDHFAVDS--NGIIVNNKQLDADNNNAYYEFIVTA 830
            :|.|.|..:  |:|:.:.:|          ..:||:.|  ..:::..::||.||....::..:.|
  Fly   203 QAFDRDKPNTPNSEVHFSMSTVPEQLSADGSPYFALKSPHRPLLILKRELDFDNGIRQFKLPIFA 267

  Fly   831 KDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDE---NAG-----PNTLVTTVVASDKDG 887
            .|:|.|......|:.:..::.:|..|||::.||...::|   ..|     |......::|.|:|.
  Fly   268 WDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFAPPIMAFDQDS 332

  Fly   888 DNVRFGF-VGGGTSSGQFVIEDITGVIRLHNKAISLDKDK-----YELNVTAMDDGSCCVNGDQT 946
            .|....: :..|.....|.:....||:.| .|.|.|:::.     :.|.:.|...       |..
  Fly   333 LNASLVYDIISGNERQLFRVNPHNGVMYL-QKEIDLEEESLPGNTFVLQLEARQK-------DNP 389

  Fly   947 IHTSTAVVVVFITDVNDNKPVFKDCSTYYP-KVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQ 1010
            :..:.|.:.|.:.|:|||.|.|:  :.||. .:.|..|.|..|::|.|.|.|:|.|.:..|::|:
  Fly   390 LKKALARIEVEVLDLNDNVPEFE--ADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVE 452

  Fly  1011 QPNQKGTKFTVDEETG--EVSTNKVFDREGDDGKFVSVTVKATDQGDPSLE-------GVCSFTV 1066
            ..:..|. |.:|..||  .|..:::.|||  ..:.:.:.|:|.::....|:       |.....|
  Fly   453 TKDAAGA-FRIDSRTGWITVRDDRLLDRE--QRRSIQLNVEALERNPSYLDDKHLKKPGPSKVQV 514

  Fly  1067 EIT--DVNDNPPLFDRQKYVE-NVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEY 1128
            |||  |.|||.|.|:.....| .|..:|..|..|.:|.|.|.|...||.::|.|..|.....:. 
  Fly   515 EITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGSGYIP- 578

  Fly  1129 FEIQAESGWIVLKKPLDGCYPRDRYRLRVSASDKGT-PA----SAADVDVEL------DVVDRNN 1182
            |.:..::|.|.:..||    .|.|..:.|.|:|:.| |:    |.|.:.:|:      ..:|...
  Fly   579 FRLDNKNGTIYVGGPL----RRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATIDDQAIDFVG 639

  Fly  1183 KP-PIWDKSIYGPIHIRENVTVGTVVTSVKASSGIEGNPTVFYRLMPGSTAQTNKFHT------F 1240
            .| ..|         :..|..:||.|..|:.:...||...:.|.|:          ||      |
  Fly   640 APYEFW---------VGANTPLGTSVGQVRTTLIYEGGDEIMYDLL----------HTYSEGVPF 685

  Fly  1241 YLQQRPDNGDTWADIKVNHPL--------DYESIKEY---------------------------- 1269
            .:::|.      ..|.|...|        .:|::..|                            
  Fly   686 AIEERS------GIITVIRELSEFKRKVYQFEAVANYLFANSSQSLVMSRSSSPLTTIASPAELS 744

  Fly  1270 -------NLTIRVENNGAQQL--------ASEATVYIMLED------------------VNDEIP 1301
                   ||||.:.|...|::        .:...::..:|:                  ||:|:.
  Fly   745 DEGVLITNLTIHIVNKPEQKVPLRPVIEEINMNVIHFHVEENVVGGIIGQLLYKNGINLVNNELG 809

  Fly  1302 LFTEREQETVLEGEPIGTKVTQVN---AIDKDGTFPNNQV------YYYIVDSPRNEGKEFFEIN 1357
            .:.|...|.......:|::....|   :.......|...|      ..||:   .|:.:...:|:
  Fly   810 TYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYII---ANQQEVVNKIS 871

  Fly  1358 L-QSGEIFTKTVFDREKKGAYALE--VEARDGAPSARPNSNGPNSVTKFIRIGIADKNDNPPYFD 1419
            : :.|.:.|.|..|||::.:|.|.  ||...|..|        .:....:.|.:.|.|||.|.|:
  Fly   872 ITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVS--------GAGIYQVNIKVDDVNDNAPKFN 928

  Fly  1420 KSLYEAEVDEN------EDIQHTVLTVTAKD-----------HDESSRIRYEITSG--------- 1458
            ...|...::||      ..:.|.:|...|.:           .|.|.....|..:|         
  Fly   929 ALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHH 993

  Fly  1459 ---NIGGAFAVKNMTG----------------------------AIYVAG--ALDYETRRRYELR 1490
               :..|||.:.|:|.                            .|...|  .||.|.::.|.|:
  Fly   994 KMPSTTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQLYNLK 1058

  Fly  1491 LAASD-NLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQN 1554
            :.|:| .....|..:.:.|.|||||.|:|||.:     ..:|.|      |::.....|.:    
  Fly  1059 IIAADTGGLSGYAHLTVLVADVNDNAPMFERIS-----VFKDSR------LEIREYTTDME---- 1108

  Fly  1555 IVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPLDRDQP---NGRPQWRFTVFAQDEGGEGLVG 1616
             :||:         .::|.....:.|..:.:..|     |   .|.|  ||.|..:...|.||..
  Fly  1109 -IYFV---------ESSSGMTAPQATAAMMLAPP-----PYHIPGSP--RFNVDRERSVGAGLGV 1156

  Fly  1617 YADVQVN---LKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEK 1678
            .|..:..   ::.:....|:|  .:|     |:...|..|:.::|.|.|   .|.||.|.|.::.
  Fly  1157 VARAKSRRRMVRALTTKCPLF--AIY-----EDTPVGTKVLQLSASDED---FGKNALLHYELQG 1211

  Fly  1679 NVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDY--------SIQVVAMDGGGLKGTGTASIR 1735
            ..:|...|.|:..:.   ||...|:..|..|.:.:|        .:.:...|..|||.:......
  Fly  1212 EQVERTPGMPMLRVH---GVKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDIDGLKDSTCLRFT 1273

  Fly  1736 VKDINDMPPQFTKDEWF---TEVDETDGTALPEMPILTVTVHDEDETNKFQYKVIDNSGYGADKF 1797
            |.|:|:..|.| |..|:   |...|...:.|.:   ||....|..|.....|.:.|:.    ..|
  Fly  1274 VMDVNNHAPTF-KKSWYSFDTPEGEYKDSVLGQ---LTAIDMDFGENANITYTLSDSH----LPF 1330

  Fly  1798 TMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNK 1862
            |:   ...:|.|||...||.|   ..:.:.|::...|...........|.   |.|.:.|||||:
  Fly  1331 TI---KPASGVLKIGGQLDRE---LKDKYSFQVIATDNAPVMQRMSSSVD---VEVNVLDINDNR 1386

  Fly  1863 PHF-----------------ERANVEVSVFE-----DTKVGTELEKFKATDPDQ--GGKSKVSYS 1903
            |.|                 :| .:.:.|::     .|:.||.:.:..|.|.|.  .|...|.||
  Fly  1387 PEFIGYDDQTKAVKFIPSVADR-TLMLPVYKAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYS 1450

  Fly  1904 IDRSSDRQRQFAI-NQNGSV-TIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQ----- 1961
            |.....:...|.| :::|:: ||.|...........|.::|.|.|||..:|||.:.|.:|     
  Fly  1451 IRHQEMQAPLFQIDSRDGTISTISRINGYNDYEHLNVSVIASDVGSPALSATAIVIVNLQGQAVT 1515

  Fly  1962 DINDNAPKFLKDYRPVLPEHVPPRKVV-------EILATDDDDRSKSNGPPFQFRLDPSAD---- 2015
            |...:.||         ||  ||..|.       |:..|::::     .|....||:.||.    
  Fly  1516 DPPKSTPK---------PE--PPANVTVFQHAYYEVKLTENNE-----APIEVMRLNLSAGLNPE 1564

  Fly  2016 ------------DIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPI----------- 2057
                        |...|....|.|.|.      .::.:|:.||||....|.:.|           
  Fly  1565 NYRWSLWLEEGLDETDAHPPFEYDAKN------MLLYALKPFDREHISRYQLRIRADRLSREARN 1623

  Fly  2058 -------VIKDHGSPAMTGTSTLTVIIGDVNDN--KMQPGSKDIFVYNYQGQSPDTPIGRVYVYD 2113
                   |:.:...........:.|.|.|.|||  |.:...:.|.....|..|...|:.||...|
  Fly  1624 YARVSYPVVDERIEGLSLNECRILVHIADENDNAPKFRGNGQPIVAVLPQSASFGYPVTRVEAND 1688

  Fly  2114 LDDWDLPDKKFYWEAMEHPR--FKLDEDSGMV-------------------TMRAGTREGRYHL- 2156
            ||:.  .:.:..:..:..|.  |.:||.||.:                   |.|.|..:||..: 
  Fly  1689 LDEG--LNAEIRYRLLNEPARLFGIDELSGNIRLLGELSRTEHIYGFDVKATDRMGADDGRSGIV 1751

  Fly  2157 ---RFKVYDRKHTQTDIPANVTVTVR-------EIPHEAVVNSGSVRL-----SGISDEDFIRVW 2206
               .:.:.:.|..:. :.|.:.|.|.       |...:|:.....|||     .|:.......::
  Fly  1752 NVFVYIINEAKQVRL-VVAGMPVEVERRIEGLMEALSDAIGKDVRVRLLEPYSGGLEPATNAYIY 1815

  Fly  2207 NYRTQSMSRSKMDRFRDKLA----DLLNTERENVD 2237
            .....:.|..:|::.:|.||    |.|..:::.:|
  Fly  1816 AVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLD 1850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
CA_like 449..541 CDD:481204
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637 20/100 (20%)
Cadherin_repeat 765..853 CDD:206637 23/102 (23%)
Cadherin_repeat 862..964 CDD:206637 24/115 (21%)
Cadherin_repeat 973..1074 CDD:206637 33/112 (29%)
Cadherin_repeat 1083..1166 CDD:206637 25/84 (30%)
Cadherin_repeat <1219..1298 CDD:206637 19/153 (12%)
Cadherin_repeat 1310..1414 CDD:206637 23/115 (20%)
Cadherin_repeat 1423..1514 CDD:206637 29/150 (19%)
Cadherin_repeat 1522..1630 CDD:206637 19/113 (17%)
Cadherin_repeat 1638..1741 CDD:206637 27/110 (25%)
CA 1770..1863 CDD:214520 24/92 (26%)
Cadherin_repeat 1871..1966 CDD:206637 30/108 (28%)
Cadherin_repeat 1974..2083 CDD:206637 29/149 (19%)
EGF 2350..2380 CDD:394967
LamG 2385..2570 CDD:238058
EGF_2 2605..2631 CDD:400365
LamG 2637..2797 CDD:238058
EGF_CA 2869..2907 CDD:238011
CADH_Y-type_LIR 3029..3088 CDD:460041
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 24/107 (22%)
Cadherin_repeat 325..407 CDD:206637 19/89 (21%)
Cadherin_repeat 416..524 CDD:206637 32/110 (29%)
Cadherin_repeat 534..626 CDD:206637 28/96 (29%)
Cadherin_repeat 641..>714 CDD:206637 19/97 (20%)
CA 851..925 CDD:214520 21/84 (25%)
CA 1026..1085 CDD:214520 16/58 (28%)
Cadherin_repeat 1177..1280 CDD:206637 29/115 (25%)
Cadherin_repeat 1289..1385 CDD:206637 26/111 (23%)
Cadherin_repeat 1414..1510 CDD:206637 28/95 (29%)
CA 1576..1658 CDD:214520 19/87 (22%)
Cadherin_repeat 1666..1760 CDD:206637 20/95 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.