DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and Cad89D

DIOPT Version :9

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster


Alignment Length:1920 Identity:428/1920 - (22%)
Similarity:712/1920 - (37%) Gaps:493/1920 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 ENQKKDSDIISIKAKSFADREIRYTLKAQGQGAG----TFNI---GPTSGIVKLAKEL----DFE 715
            |:.:...:|:.::|..      |.|...:|..|.    .||:   ..|:.:|.||:.|    |.:
  Fly    80 EDAQVGKEILRLQAYP------RSTAALKGADASGDHKYFNLTEHNATTLVVSLARSLERLVDRD 138

  Fly   716 DLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILR-V 779
            ..|....:.::....::.....:.:.:|:.:.|||||||:|....|.. :|||:..:.:.|.. |
  Fly   139 VPRNLLKFRILCAGKQEKLEEGSYLSITVYIEDVNDNAPEFLNVPYVV-DVDENTSIESIIFEGV 202

  Fly   780 KAMDSDSGS--NAEIEYLVS----------DDHFAVDS--NGIIVNNKQLDADNNNAYYEFIVTA 830
            :|.|.|..:  |:|:.:.:|          ..:||:.|  ..:::..::||.||....::..:.|
  Fly   203 QAFDRDKPNTPNSEVHFSMSTVPEQLSADGSPYFALKSPHRPLLILKRELDFDNGIRQFKLPIFA 267

  Fly   831 KDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDE---NAG-----PNTLVTTVVASDKDG 887
            .|:|.|......|:.:..::.:|..|||::.||...::|   ..|     |......::|.|:|.
  Fly   268 WDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFAPPIMAFDQDS 332

  Fly   888 DNVRFGF-VGGGTSSGQFVIEDITGVIRLHNKAISLDKDK-----YELNVTAMDDGSCCVNGDQT 946
            .|....: :..|.....|.:....||:.| .|.|.|:::.     :.|.:.|...       |..
  Fly   333 LNASLVYDIISGNERQLFRVNPHNGVMYL-QKEIDLEEESLPGNTFVLQLEARQK-------DNP 389

  Fly   947 IHTSTAVVVVFITDVNDNKPVFKDCSTYYP-KVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQ 1010
            :..:.|.:.|.:.|:|||.|.|:  :.||. .:.|..|.|..|::|.|.|.|:|.|.:..|::|:
  Fly   390 LKKALARIEVEVLDLNDNVPEFE--ADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVE 452

  Fly  1011 QPNQKGTKFTVDEETG--EVSTNKVFDREGDDGKFVSVTVKATDQGDPSLE-------GVCSFTV 1066
            ..:..|. |.:|..||  .|..:::.|||  ..:.:.:.|:|.::....|:       |.....|
  Fly   453 TKDAAGA-FRIDSRTGWITVRDDRLLDRE--QRRSIQLNVEALERNPSYLDDKHLKKPGPSKVQV 514

  Fly  1067 EIT--DVNDNPPLFDRQKYVE-NVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEY 1128
            |||  |.|||.|.|:.....| .|..:|..|..|.:|.|.|.|...||.::|.|..|.....:. 
  Fly   515 EITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGSGYIP- 578

  Fly  1129 FEIQAESGWIVLKKPLDGCYPRDRYRLRVSASDKGT-PA----SAADVDVEL------DVVDRNN 1182
            |.:..::|.|.:..||    .|.|..:.|.|:|:.| |:    |.|.:.:|:      ..:|...
  Fly   579 FRLDNKNGTIYVGGPL----RRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATIDDQAIDFVG 639

  Fly  1183 KP-PIWDKSIYGPIHIRENVTVGTVVTSVKASSGIEGNPTVFYRLMPGSTAQTNKFHT------F 1240
            .| ..|         :..|..:||.|..|:.:...||...:.|.|:          ||      |
  Fly   640 APYEFW---------VGANTPLGTSVGQVRTTLIYEGGDEIMYDLL----------HTYSEGVPF 685

  Fly  1241 YLQQRPDNGDTWADIKVNHPL--------DYESIKEY---------------------------- 1269
            .:::|.      ..|.|...|        .:|::..|                            
  Fly   686 AIEERS------GIITVIRELSEFKRKVYQFEAVANYLFANSSQSLVMSRSSSPLTTIASPAELS 744

  Fly  1270 -------NLTIRVENNGAQQL--------ASEATVYIMLED------------------VNDEIP 1301
                   ||||.:.|...|::        .:...::..:|:                  ||:|:.
  Fly   745 DEGVLITNLTIHIVNKPEQKVPLRPVIEEINMNVIHFHVEENVVGGIIGQLLYKNGINLVNNELG 809

  Fly  1302 LFTEREQETVLEGEPIGTKVTQVN---AIDKDGTFPNNQV------YYYIVDSPRNEGKEFFEIN 1357
            .:.|...|.......:|::....|   :.......|...|      ..||:   .|:.:...:|:
  Fly   810 TYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYII---ANQQEVVNKIS 871

  Fly  1358 L-QSGEIFTKTVFDREKKGAYALE--VEARDGAPSARPNSNGPNSVTKFIRIGIADKNDNPPYFD 1419
            : :.|.:.|.|..|||::.:|.|.  ||...|..|        .:....:.|.:.|.|||.|.|:
  Fly   872 ITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVS--------GAGIYQVNIKVDDVNDNAPKFN 928

  Fly  1420 KSLYEAEVDEN------EDIQHTVLTVTAKD-----------HDESSRIRYEITSG--------- 1458
            ...|...::||      ..:.|.:|...|.:           .|.|.....|..:|         
  Fly   929 ALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHH 993

  Fly  1459 ---NIGGAFAVKNMTG----------------------------AIYVAG--ALDYETRRRYELR 1490
               :..|||.:.|:|.                            .|...|  .||.|.::.|.|:
  Fly   994 KMPSTTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQLYNLK 1058

  Fly  1491 LAASD-NLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQN 1554
            :.|:| .....|..:.:.|.|||||.|:|||.:     ..:|.|      |::.....|.:    
  Fly  1059 IIAADTGGLSGYAHLTVLVADVNDNAPMFERIS-----VFKDSR------LEIREYTTDME---- 1108

  Fly  1555 IVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPLDRDQP---NGRPQWRFTVFAQDEGGEGLVG 1616
             :||:         .::|.....:.|..:.:..|     |   .|.|  ||.|..:...|.||..
  Fly  1109 -IYFV---------ESSSGMTAPQATAAMMLAPP-----PYHIPGSP--RFNVDRERSVGAGLGV 1156

  Fly  1617 YADVQVN---LKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEK 1678
            .|..:..   ::.:....|:|  .:|     |:...|..|:.::|.|.|   .|.||.|.|.::.
  Fly  1157 VARAKSRRRMVRALTTKCPLF--AIY-----EDTPVGTKVLQLSASDED---FGKNALLHYELQG 1211

  Fly  1679 NVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDY--------SIQVVAMDGGGLKGTGTASIR 1735
            ..:|...|.|:..:.   ||...|:..|..|.:.:|        .:.:...|..|||.:......
  Fly  1212 EQVERTPGMPMLRVH---GVKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDIDGLKDSTCLRFT 1273

  Fly  1736 VKDINDMPPQFTKDEWF---TEVDETDGTALPEMPILTVTVHDEDETNKFQYKVIDNSGYGADKF 1797
            |.|:|:..|.| |..|:   |...|...:.|.:   ||....|..|.....|.:.|:.    ..|
  Fly  1274 VMDVNNHAPTF-KKSWYSFDTPEGEYKDSVLGQ---LTAIDMDFGENANITYTLSDSH----LPF 1330

  Fly  1798 TMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNK 1862
            |:   ...:|.|||...||.|   ..:.:.|::...|...........|.   |.|.:.|||||:
  Fly  1331 TI---KPASGVLKIGGQLDRE---LKDKYSFQVIATDNAPVMQRMSSSVD---VEVNVLDINDNR 1386

  Fly  1863 PHF-----------------ERANVEVSVFE-----DTKVGTELEKFKATDPDQ--GGKSKVSYS 1903
            |.|                 :| .:.:.|::     .|:.||.:.:..|.|.|.  .|...|.||
  Fly  1387 PEFIGYDDQTKAVKFIPSVADR-TLMLPVYKAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYS 1450

  Fly  1904 IDRSSDRQRQFAI-NQNGSV-TIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQ----- 1961
            |.....:...|.| :::|:: ||.|...........|.::|.|.|||..:|||.:.|.:|     
  Fly  1451 IRHQEMQAPLFQIDSRDGTISTISRINGYNDYEHLNVSVIASDVGSPALSATAIVIVNLQGQAVT 1515

  Fly  1962 DINDNAPKFLKDYRPVLPEHVPPRKVV-------EILATDDDDRSKSNGPPFQFRLDPSAD---- 2015
            |...:.||         ||  ||..|.       |:..|::::     .|....||:.||.    
  Fly  1516 DPPKSTPK---------PE--PPANVTVFQHAYYEVKLTENNE-----APIEVMRLNLSAGLNPE 1564

  Fly  2016 ------------DIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPI----------- 2057
                        |...|....|.|.|.      .::.:|:.||||....|.:.|           
  Fly  1565 NYRWSLWLEEGLDETDAHPPFEYDAKN------MLLYALKPFDREHISRYQLRIRADRLSREARN 1623

  Fly  2058 -------VIKDHGSPAMTGTSTLTVIIGDVNDN--KMQPGSKDIFVYNYQGQSPDTPIGRVYVYD 2113
                   |:.:...........:.|.|.|.|||  |.:...:.|.....|..|...|:.||...|
  Fly  1624 YARVSYPVVDERIEGLSLNECRILVHIADENDNAPKFRGNGQPIVAVLPQSASFGYPVTRVEAND 1688

  Fly  2114 LDDWDLPDKKFYWEAMEHPR--FKLDEDSGMV-------------------TMRAGTREGRYHL- 2156
            ||:.  .:.:..:..:..|.  |.:||.||.:                   |.|.|..:||..: 
  Fly  1689 LDEG--LNAEIRYRLLNEPARLFGIDELSGNIRLLGELSRTEHIYGFDVKATDRMGADDGRSGIV 1751

  Fly  2157 ---RFKVYDRKHTQTDIPANVTVTVR-------EIPHEAVVNSGSVRL-----SGISDEDFIRVW 2206
               .:.:.:.|..:. :.|.:.|.|.       |...:|:.....|||     .|:.......::
  Fly  1752 NVFVYIINEAKQVRL-VVAGMPVEVERRIEGLMEALSDAIGKDVRVRLLEPYSGGLEPATNAYIY 1815

  Fly  2207 NYRTQSMSRSKMDRFRDKLA----DLLNTERENVD 2237
            .....:.|..:|::.:|.||    |.|..:::.:|
  Fly  1816 AVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLD 1850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
Cadherin_repeat 337..396 CDD:206637
E_set 449..541 CDD:298831
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637 20/100 (20%)
Cadherin_repeat 765..853 CDD:206637 23/102 (23%)
Cadherin_repeat 862..964 CDD:206637 24/115 (21%)
Cadherin_repeat 973..1074 CDD:206637 33/112 (29%)
Cadherin_repeat 1083..1166 CDD:206637 25/84 (30%)
Cadherin_repeat <1219..1298 CDD:206637 19/153 (12%)
Cadherin_repeat 1310..1414 CDD:206637 23/115 (20%)
Cadherin_repeat 1423..1514 CDD:206637 29/150 (19%)
Cadherin_repeat 1522..1630 CDD:206637 19/113 (17%)
Cadherin_repeat 1638..1741 CDD:206637 27/110 (25%)
Cadherin_repeat 1762..1861 CDD:206637 24/98 (24%)
Cadherin_repeat 1871..1966 CDD:206637 30/108 (28%)
Cadherin_repeat 1974..2083 CDD:206637 29/149 (19%)
EGF 2350..2380 CDD:278437
LamG 2385..2570 CDD:238058
EGF_2 <2605..2631 CDD:285248
Laminin_G_2 2665..2800 CDD:280389
EGF_CA 2869..2907 CDD:238011
Cadherin_C 2952..3088 CDD:279398
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 24/107 (22%)
Cadherin_repeat 325..407 CDD:206637 19/89 (21%)
Cadherin_repeat 416..524 CDD:206637 32/110 (29%)
Cadherin_repeat 534..626 CDD:206637 28/96 (29%)
Cadherin_repeat 641..>714 CDD:206637 19/97 (20%)
CA 851..925 CDD:214520 21/84 (25%)
CA 1026..1085 CDD:214520 16/58 (28%)
Cadherin_repeat 1177..1280 CDD:206637 29/115 (25%)
Cadherin_repeat 1289..1385 CDD:206637 26/111 (23%)
Cadherin_repeat 1414..1510 CDD:206637 28/95 (29%)
CA 1576..1658 CDD:214520 19/87 (22%)
Cadherin_repeat 1666..1760 CDD:206637 20/95 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464697
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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