Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_999974.1 | Gene: | cdh23 / 407978 | ZFINID: | ZDB-GENE-040513-7 | Length: | 3366 | Species: | Danio rerio |
Alignment Length: | 2755 | Identity: | 671/2755 - (24%) |
---|---|---|---|
Similarity: | 1073/2755 - (38%) | Gaps: | 762/2755 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 GDVEKSSLSHHSE-MSLVLPHDTYPGFSIKKFKTHPVKINGSSHSGAAAYHMLDT--DYSKYFTV 120
Fly 121 LED---GVVMTTADISPLVNRPVQLVVVEQTPNATNTH---------NLQLFVMHRNDM------ 167
Fly 168 LRFSGSLLDASGEVRENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQE 232
Fly 233 RKANKNIQISAKSLVINGDDESGVWLVTNRPLDREERAH---YDLSVEASDVDGLDRTVSKIQIT 294
Fly 295 ------VLDENDNRPIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDAD-------- 345
Fly 346 ----GDKIAYRLKSPSNVV--------IIVPQTGEI-------MLAGEPTSN-----ELLIEVI- 385
Fly 386 -----------AHDLRYPSLVSAKPAKVLLEFLAAE---PVSFIMQHLEHDDINNHSHHRE---- 432
Fly 433 ----------KRRVTRAV--------RPTKRIEFTEADGDTEGKSVFQLE---------KETDKE 470
Fly 471 TFKIR---DDNPWVTV--------------------ETNGAVRVKKKWDYEELGPEKTIDFWVII 512
Fly 513 TNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPN----TPVFTLQARDPD 573
Fly 574 TDHNIHY--FIVRDRTGGRFEVDERSGVVRTRGTDLFQLDM--EYVLYVKAEDQNGKVDDRRFQS 634
Fly 635 TPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKA--KSFADREIRYTLKAQGQGAGT 696
Fly 697 FNIGP---------------TSGIVKLAKELDFE--DLRQPHVYSLIVTATEDSG----GFSTSV 740
Fly 741 DLTIRVTDVNDNAPKF-ELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSDDHFAVD 804
Fly 805 -----SNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYT 864
Fly 865 PNVDENAGPNTLVTTVVASDKD-GDNVRFG-FVGGGTSSGQFVIEDITGVIRLHNKAISLDKD-- 925
Fly 926 -KYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVI 989
Fly 990 KVVATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEVSTNKV-FDREGDDGKFVSVTVKATDQ 1053
Fly 1054 GDPSLEGVCSFTVEITDVNDNPPLFDRQKYVE-NVKQDASIGTNILRVSASDEDADNNGAIVYSL 1117
Fly 1118 TA----------------------------------------PF--------------------- 1121
Fly 1122 ----------------------------NPNDLEY-------------FEIQAESGWIVLKKPLD 1145
Fly 1146 GCYPRDR---YRLRVSASDKGTPASAADVDVELDVVDRNNKPPIWDKSIYGPIHIRENVTVGTVV 1207
Fly 1208 TSVKASSGIEG-NPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYESIKEYNL 1271
Fly 1272 TIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEPI--GTKVTQVNAIDKD-GTF 1333
Fly 1334 PNNQVYYYIVDSPRNEGKE--FFEINLQSGEIFTK-TVFDREKKGAYALEVEAR-DGAPSARPNS 1394
Fly 1395 NGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENED-IQHTVLTVTAKDHDE--SSRIRYEIT 1456
Fly 1457 SGNIGGAFAVKNMTGAIYVAGALDYE-TRRRYELRLAASDNLK------ENYTTVIIHVKDVNDN 1514
Fly 1515 PPVFERP---------------------------------------------------------- 1521
Fly 1522 ----------TYRTQITEED--------------------DR-----NLPKR------------V 1539
Fly 1540 LQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTV 1604
Fly 1605 FAQDEGGEGLVGYAD---VQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTA-VDYDDPN 1665
Fly 1666 EGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKT---AVCCLDRE--RTPDYSIQVVAMDGGG 1725
Fly 1726 LKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPILTVTVHDEDETNKFQYKVIDNS 1790
Fly 1791 GYGADKFTMVRNNDGTGSLKIV--QPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVV 1853
Fly 1854 KLRDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVSY---SIDRSSD------ 1909
Fly 1910 -RQRQFAIN-QNGSVTIQRSLDREVVPRHQVKILAIDDGS-----PPKTATATLTVIVQDINDNA 1967
Fly 1968 PKFLKDYRP---------VLPEHVPPRKVVEILATDDDDRSKSNGPPFQ-------------FRL 2010
Fly 2011 -DPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLT 2074
Fly 2075 VIIGDVNDNK---MQP-GSKDIF--------VYNYQGQSPDTPIGRVYVYDLDDWDLPDKKFYWE 2127
Fly 2128 AMEHPRFKLDEDSG-MVTMRAGTREGRYHLRFKVYDRKHTQTDIPANVTVTVREIPHEAVVNSGS 2191
Fly 2192 VRLSGISDEDFIRVWNYR--TQS-------------MSRSKMDRFRDKL---------AD----- 2227
Fly 2228 -----------LLNTERENVDIFSVQLKRKHPPL--------TDVRFSAHGSPYYKPVRLNGIVL 2273
Fly 2274 MHREE------------IEKDVGIN 2286 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | 35/131 (27%) |
Cadherin_repeat | 337..396 | CDD:206637 | 14/102 (14%) | ||
E_set | 449..541 | CDD:298831 | 25/123 (20%) | ||
Cadherin_repeat | 549..>625 | CDD:206637 | 24/83 (29%) | ||
Cadherin_repeat | 655..752 | CDD:206637 | 27/119 (23%) | ||
Cadherin_repeat | 765..853 | CDD:206637 | 24/92 (26%) | ||
Cadherin_repeat | 862..964 | CDD:206637 | 33/106 (31%) | ||
Cadherin_repeat | 973..1074 | CDD:206637 | 33/101 (33%) | ||
Cadherin_repeat | 1083..1166 | CDD:206637 | 34/188 (18%) | ||
Cadherin_repeat | <1219..1298 | CDD:206637 | 20/78 (26%) | ||
Cadherin_repeat | 1310..1414 | CDD:206637 | 36/110 (33%) | ||
Cadherin_repeat | 1423..1514 | CDD:206637 | 37/100 (37%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 34/147 (23%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 32/108 (30%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 21/100 (21%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 30/110 (27%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 32/131 (24%) | ||
EGF | 2350..2380 | CDD:278437 | |||
LamG | 2385..2570 | CDD:238058 | |||
EGF_2 | <2605..2631 | CDD:285248 | |||
Laminin_G_2 | 2665..2800 | CDD:280389 | |||
EGF_CA | 2869..2907 | CDD:238011 | |||
Cadherin_C | 2952..3088 | CDD:279398 | |||
cdh23 | NP_999974.1 | Cadherin_repeat | 48..134 | CDD:206637 | 3/4 (75%) |
Cadherin_repeat | 142..237 | CDD:206637 | 20/108 (19%) | ||
Cadherin_repeat | 246..350 | CDD:206637 | 36/140 (26%) | ||
Cadherin_repeat | 358..460 | CDD:206637 | 17/112 (15%) | ||
Cadherin_repeat | 469..561 | CDD:206637 | 15/94 (16%) | ||
Cadherin_repeat | 570..671 | CDD:206637 | 19/104 (18%) | ||
Cadherin_repeat | 679..778 | CDD:206637 | 25/105 (24%) | ||
Cadherin_repeat | 786..890 | CDD:206637 | 27/119 (23%) | ||
Cadherin_repeat | 898..994 | CDD:206637 | 26/98 (27%) | ||
Cadherin_repeat | 1003..1102 | CDD:206637 | 33/106 (31%) | ||
Cadherin_repeat | 1110..1206 | CDD:206637 | 32/100 (32%) | ||
Cadherin_repeat | 1221..1311 | CDD:206637 | 15/89 (17%) | ||
Cadherin_repeat | 1321..1417 | CDD:206637 | 23/100 (23%) | ||
Cadherin_repeat | 1428..1526 | CDD:206637 | 28/105 (27%) | ||
Cadherin_repeat | 1536..1633 | CDD:206637 | 36/111 (32%) | ||
Cadherin_repeat | 1641..1743 | CDD:206637 | 37/101 (37%) | ||
Cadherin_repeat | 1755..1850 | CDD:206637 | 4/94 (4%) | ||
Cadherin_repeat | 1858..1958 | CDD:206637 | 27/108 (25%) | ||
Cadherin_repeat | 1966..2068 | CDD:206637 | 33/109 (30%) | ||
Cadherin_repeat | 2076..2172 | CDD:206637 | 22/111 (20%) | ||
Cadherin_repeat | 2181..2292 | CDD:206637 | 30/112 (27%) | ||
Cadherin_repeat | 2304..2401 | CDD:206637 | 30/123 (24%) | ||
Cadherin_repeat | 2410..2507 | CDD:206637 | 23/121 (19%) | ||
Cadherin_repeat | 2516..2610 | CDD:206637 | 16/95 (17%) | ||
Cadherin_repeat | 2624..2722 | CDD:206637 | 5/25 (20%) | ||
Cadherin_repeat | 2738..2849 | CDD:206637 | |||
Cadherin_repeat | 2858..2959 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |