DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and AGRN

DIOPT Version :9

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:NP_001292204.1 Gene:AGRN / 375790 HGNCID:329 Length:2068 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
Cadherin_repeat 337..396 CDD:206637
E_set 449..541 CDD:298831
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637
Cadherin_repeat 765..853 CDD:206637
Cadherin_repeat 862..964 CDD:206637
Cadherin_repeat 973..1074 CDD:206637
Cadherin_repeat 1083..1166 CDD:206637
Cadherin_repeat <1219..1298 CDD:206637
Cadherin_repeat 1310..1414 CDD:206637
Cadherin_repeat 1423..1514 CDD:206637
Cadherin_repeat 1522..1630 CDD:206637
Cadherin_repeat 1638..1741 CDD:206637
Cadherin_repeat 1762..1861 CDD:206637
Cadherin_repeat 1871..1966 CDD:206637
Cadherin_repeat 1974..2083 CDD:206637
EGF 2350..2380 CDD:278437
LamG 2385..2570 CDD:238058
EGF_2 <2605..2631 CDD:285248
Laminin_G_2 2665..2800 CDD:280389
EGF_CA 2869..2907 CDD:238011
Cadherin_C 2952..3088 CDD:279398
AGRNNP_001292204.1 NtA 44..146 CDD:308653
KAZAL 196..242 CDD:197624
KAZAL 272..317 CDD:197624
KAZAL_FS 349..389 CDD:320757
KAZAL_FS 421..461 CDD:238052
KAZAL 489..534 CDD:197624
KAZAL 554..599 CDD:197624
KAZAL 619..664 CDD:197624
KAZAL 704..750 CDD:197624
Laminin_EGF 793..835 CDD:278482
Laminin_EGF 847..>883 CDD:278482
KAZAL 922..969 CDD:197624
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 995..1096
SEA 1130..1254 CDD:214554
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1277..1334
EGF 1333..1363 CDD:306513
Laminin_G_1 1400..1531 CDD:278483
EGF_CA 1555..1585 CDD:238011
Laminin_G_1 1668..1803 CDD:278483
EGF_CA 1825..1857 CDD:238011
Laminin_G_1 1921..2051 CDD:278483
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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