Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
Alignment Length: | 2165 | Identity: | 622/2165 - (28%) |
---|---|---|---|
Similarity: | 861/2165 - (39%) | Gaps: | 777/2165 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 962 NDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETG 1026
Fly 1027 EVSTNKVFDR-EGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQD 1090
Fly 1091 ASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLKKPLDGCYPRDRYRL 1155
Fly 1156 RVSASD-KGTPASAADVDVELDVVDRNNKPPIWDKSIYGPIHIRENVTVGT-VVTSVKASSGIEG 1218
Fly 1219 NPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYESIKEYNLTIRVENNGAQQL 1283
Fly 1284 ASEATVYIMLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAIDKDGTFPNNQVYYYIVDSPRN 1348
Fly 1349 EGKEFFEINLQSGEIFTKTVFDREKKGAYALEVEARDGAPSARPNSNGPNSVTKFIRIGIADKND 1413
Fly 1414 NPPYFDKSLYEAE-VDENEDIQHTVLTVTAKDHDESSRIRYEITSGNIGGAFAVKNMTGAIYVAG 1477
Fly 1478 ALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEE---DDRNLPKRV 1539
Fly 1540 LQVTATDGD-KDR--PQNIVYFLTGQGIDPDNPANSKFDINRTT----GEIFVLKPLDRDQPNGR 1597
Fly 1598 PQWRFTVFAQDEGGEG--LVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVD 1660
Fly 1661 YDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDYSIQVVAMDGGG 1725
Fly 1726 LKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPILTVTVHDEDETNKFQYKVIDNS 1790
Fly 1791 GYGADKFTMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKL 1855
Fly 1856 RDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNG 1920
Fly 1921 SVTIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPPR 1985
Fly 1986 KVVEILATDDDDRSKSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQ 2050
Fly 2051 KEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLD 2115
Fly 2116 DWDLPDKKFYWEAMEHPRFKLDEDSGMVTMRAGTREGRYHLRFKV-----YDRKHTQTDIPANVT 2175
Fly 2176 VTVREIPHEAVVNSGSVRLSGISDEDFIRVWNYRTQSMSRSKMDRFRDKLADLLNTERENVDIFS 2240
Fly 2241 VQLKRKHPPLTDVRFSAHGSPYYKPVRLNGIVLMHREEIEKDVGINITMVGIDECLYENQMCEGS 2305
Fly 2306 CTNSLEISPLPYMVNANKTALVGVRVDTIADCTCGARNFTKPESCRTTPCHNGGRCVDTRFGPH- 2369
Fly 2370 -CSCPVGYTGPRCQQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKPDGLIIYNGPIVPPERDE 2433
Fly 2434 TL-ISDFIALELERGYPRLLIDFGSGTLELRVKTKKTLDDGEWHRIDLFWDTESIRMVVDFCKSA 2497
Fly 2498 EIAEMEDGTPPEFDDMSCQARG-QIPPFNEYLNVNAPLQVGG--LYREQFDQSLYFWHYMPTAKG 2559
Fly 2560 FDGCIRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEVCAQTETTARCWEHGNCVGSLSEARCHCRP 2624
Fly 2625 GWTGPACNIPTIPTTFKAQSYVKYALSFEPDRFSTQVQLRFRTREEYGELFRVSDQHNREYGILE 2689
Fly 2690 IKDGHLHFRYNLNSLRTEEKDLWLNAIVVNDGQWHVVKVNRYGSAATLELDGGEGRRYNETFEFV 2754
Fly 2755 GHQWLLVDKQEGVYAGGKAEYTGVRTFEVYADYQKSCLDDIRLEGKHLPLPPAMNGTQWGQATMA 2819
Fly 2820 RNLEKGCPSNKPCSNVICPDPFECVDLWNVYECTCGEGRIMSPDSKGCMDRNECLDMPCMNGATC 2884
Fly 2885 INLEPRLRYRCICPDGFWGENCELVQEGQTLKLSMGALAAILVCLLIILILVLVFVVYNRRREA- 2948
Fly 2949 HIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPMPPELAPMKMPIMYPVMTLMPG 3013
Fly 3014 QEPNVGMFIEEHKKRADGDPNAPPFDDLRNYAYEGGGSTAGSLSSLASGTDDEQQEYDYLGAWGP 3078
Fly 3079 RFDKLANMYGPEAPNPHNTE 3098 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
Cadherin_repeat | 337..396 | CDD:206637 | |||
E_set | 449..541 | CDD:298831 | |||
Cadherin_repeat | 549..>625 | CDD:206637 | |||
Cadherin_repeat | 655..752 | CDD:206637 | |||
Cadherin_repeat | 765..853 | CDD:206637 | |||
Cadherin_repeat | 862..964 | CDD:206637 | 0/1 (0%) | ||
Cadherin_repeat | 973..1074 | CDD:206637 | 45/101 (45%) | ||
Cadherin_repeat | 1083..1166 | CDD:206637 | 27/83 (33%) | ||
Cadherin_repeat | <1219..1298 | CDD:206637 | 28/78 (36%) | ||
Cadherin_repeat | 1310..1414 | CDD:206637 | 43/103 (42%) | ||
Cadherin_repeat | 1423..1514 | CDD:206637 | 41/91 (45%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 44/119 (37%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 1/102 (1%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 2/98 (2%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 0/94 (0%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 38/108 (35%) | ||
EGF | 2350..2380 | CDD:278437 | 11/31 (35%) | ||
LamG | 2385..2570 | CDD:238058 | 74/188 (39%) | ||
EGF_2 | <2605..2631 | CDD:285248 | 0/25 (0%) | ||
Laminin_G_2 | 2665..2800 | CDD:280389 | 2/134 (1%) | ||
EGF_CA | 2869..2907 | CDD:238011 | 0/37 (0%) | ||
Cadherin_C | 2952..3088 | CDD:279398 | 60/135 (44%) | ||
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 45/100 (45%) |
Cadherin_repeat | 200..292 | CDD:206637 | 30/95 (32%) | ||
CA | 332..410 | CDD:214520 | 30/83 (36%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 43/105 (41%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 38/87 (44%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 44/118 (37%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 43/341 (13%) | ||
LamG | 1127..1294 | CDD:238058 | 74/188 (39%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 62/138 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45464699 | |
Domainoid | 1 | 1.000 | 201 | 1.000 | Domainoid score | I2960 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D3586at50557 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |