Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038953306.1 | Gene: | Dsg1 / 291755 | RGDID: | 1309925 | Length: | 1048 | Species: | Rattus norvegicus |
Alignment Length: | 1054 | Identity: | 230/1054 - (21%) |
---|---|---|---|
Similarity: | 386/1054 - (36%) | Gaps: | 271/1054 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 1479 LDYETRRRYELRLA----------ASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITE---- 1529
Fly 1530 -----EDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPL 1589
Fly 1590 DRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVM 1654
Fly 1655 TMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDYSIQVV 1719
Fly 1720 A--MDGG--GLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPILTVTVHDEDETN 1780
Fly 1781 KFQYKVIDNSGYGADKFT----MVRNNDG------------TGSLKIVQPLDYE--DQLQSNGFR 1827
Fly 1828 FRIQVNDKGEDNDN--DKYHVAYSWVVVKLRDINDNKPHFERANVEVSVFE-------------- 1876
Fly 1877 DTKVGTELEKFKATDPDQGGKS-KVSYSIDRSSDRQRQFAINQNGSVTIQRSLDRE----VVPRH 1936
Fly 1937 QVKILAIDDGSPPKTATATLTVIVQDI---------------NDNAPKFLKDYRPVLPEHVPPRK 1986
Fly 1987 VVEILATDDDDRSKSNGPPFQFRLDPSADDIIRASFKVEQ---------DQKGANGDGMAVISSL 2042
Fly 2043 RSFDREQQKEYMIPI-----------VIKDHGSPAMTGTSTLTVIIGDVNDNKMQPGSKDIF-VY 2095
Fly 2096 NYQGQSPDTPIGRVYVYDLDDWDLPDKKFYWEAMEHPRFK-----LDEDSGMVTMRAGT----RE 2151
Fly 2152 GRYHLRF-------KVYDRKHTQTDIPANVTVTVREIPHEAVVNSGSVRLSGISDEDFIRVWNYR 2209
Fly 2210 TQSMSRSKMD----RFRDKLADL-LNTERENVDIF-------------------SVQLKRKHPPL 2250
Fly 2251 TDVRFSAHGSPYYKPVRL-------NGIVLMHREEIEKDVGINITMVGIDECLYENQMCEGSCTN 2308
Fly 2309 SLEISPLPYMVNANKTALVGVRVDTIADCTCGARNFTKPESCRTTPCHNGGRCVDTR--FGPHCS 2371
Fly 2372 CPVGYTGPRCQQTT 2385 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
Cadherin_repeat | 337..396 | CDD:206637 | |||
E_set | 449..541 | CDD:298831 | |||
Cadherin_repeat | 549..>625 | CDD:206637 | |||
Cadherin_repeat | 655..752 | CDD:206637 | |||
Cadherin_repeat | 765..853 | CDD:206637 | |||
Cadherin_repeat | 862..964 | CDD:206637 | |||
Cadherin_repeat | 973..1074 | CDD:206637 | |||
Cadherin_repeat | 1083..1166 | CDD:206637 | |||
Cadherin_repeat | <1219..1298 | CDD:206637 | |||
Cadherin_repeat | 1310..1414 | CDD:206637 | |||
Cadherin_repeat | 1423..1514 | CDD:206637 | 12/44 (27%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 30/116 (26%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 36/106 (34%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 27/118 (23%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 27/128 (21%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 20/128 (16%) | ||
EGF | 2350..2380 | CDD:278437 | 6/31 (19%) | ||
LamG | 2385..2570 | CDD:238058 | 0/1 (0%) | ||
EGF_2 | <2605..2631 | CDD:285248 | |||
Laminin_G_2 | 2665..2800 | CDD:280389 | |||
EGF_CA | 2869..2907 | CDD:238011 | |||
Cadherin_C | 2952..3088 | CDD:279398 | |||
Dsg1 | XP_038953306.1 | CA | 84..166 | CDD:214520 | 27/88 (31%) |
Cadherin_repeat | 176..276 | CDD:206637 | 36/103 (35%) | ||
Cadherin | 285..388 | CDD:394985 | 28/124 (23%) | ||
Cadherin_repeat | 412..494 | CDD:206637 | 23/87 (26%) | ||
Cadherin_C | 657..772 | CDD:395833 | 26/129 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |