| Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017169419.1 | Gene: | Cdh23 / 22295 | MGIID: | 1890219 | Length: | 3361 | Species: | Mus musculus |
| Alignment Length: | 2431 | Identity: | 647/2431 - (26%) |
|---|---|---|---|
| Similarity: | 980/2431 - (40%) | Gaps: | 444/2431 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 71 EMSLVLPHDTYPGFSIKKFKTHPVKINGSSHSGAAAYHMLDTDYS-------KY--------FTV 120
Fly 121 LED-GVVMTTADIS-PLVNRPVQLVVVEQTPNATNTHNLQLFVMHRNDML-RFSGSLLDA-SGEV 181
Fly 182 RENQPAGT---RVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAF--------------- 228
Fly 229 ----------------ALQERKAN---------------------------------KNIQISAK 244
Fly 245 SLVINGDD---------ESGVW----------------LVTNRPLDREERAHYDLSVEASD--VD 282
Fly 283 GLDRT-VSKIQITVLDENDNRPIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDAD- 345
Fly 346 GDK--IAYRLKSPSNVVIIVPQTGEI-----MLAGE---PTSNELLIEVIAH--DLRYPSLVSAK 398
Fly 399 PAKVLLEFLAAEPVSFIMQHLEHDDINNHSHHREKRRVTRAVRPT-KRIEFTE--ADGDTEGKSV 460
Fly 461 FQL------EKETDKETFKIRDDNP---WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMG 516
Fly 517 HNAGI-KYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--I 578
Fly 579 HYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDME----YVLYVKAEDQNGKVDDRRFQSTPEER 639
Fly 640 LSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADRE---IRYTLKAQGQGAGTFNIG 700
Fly 701 PTSG-IVKLAKELDFEDLRQPHVYSLIVTA-TEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQA 763
Fly 764 HNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLV---SDDHFAVD-SNGIIVNNKQLDADNNNAYY 824
Fly 825 EFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDN 889
Fly 890 ---VRFGFVGGGTSSGQFVIEDITGVIRLHNKAISLDKDK---YELNVTAMDDGSCCVNGDQTIH 948
Fly 949 TSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPN 1013
Fly 1014 QKGT--KFTVDEETGEVSTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPP 1076
Fly 1077 LFDRQ-KYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVL 1140
Fly 1141 KKPLDGCYPRDR-----YRLRVSASDKGTPASAADVDVELDVVDRNNKPPIWDKSIYGPIHIREN 1200
Fly 1201 VTVGTVVTSVKASSGIEG-NPTVFYRLMPG---STAQTNKFHTFYLQQRPDNGDTWADIKVNHPL 1261
Fly 1262 DYE-SIKEYNLTIRVENNG---AQQLASEATVYIMLEDVNDEIPLFTEREQE---TVLEGEPIGT 1319
Fly 1320 KVTQVNAIDKDGTFPNNQVYYYIVD-SPRNEGKEFFEINLQSGEIFTK--TVFDREKKGAYALEV 1381
Fly 1382 EARD-GAPSARPNSNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH 1445
Fly 1446 DE--SSRIRYEITSGNIGGAFAVKNMTGAIYVAGALDYETRRRYELRLAASDN------LKENYT 1502
Fly 1503 TVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQ--VTATDGDKDRPQNIVYFLTGQGID 1565
Fly 1566 PDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQW-RFTVFAQDEGGEGLVGYADVQVNLKDIND 1629
Fly 1630 NAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEP 1694
Fly 1695 DTGVIKTAVCCLDRERTPDYSIQVVAMDGG--GLKGTGTASIRVKDINDMPPQFTKDEWFTEVDE 1757
Fly 1758 TDGTALPEMPILTVTVHDEDETNKFQYKVI------DNSGYGADKFTMVRNNDGTGSLKIVQPLD 1816
Fly 1817 YEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERANVEV---SVFEDT 1878
Fly 1879 KVGTELEKFKATDPDQGGKSKVSYS-IDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQVKILA 1942
Fly 1943 IDDGSPPKTATATLTVIVQDINDNAPKF-LKDYRPVLPEHVPPRKVV-EILATDDD-------DR 1998
Fly 1999 SKSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIKDHG 2063
Fly 2064 SPAMTG--TSTLTVIIG--DVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDDWDLPDKKF 2124
Fly 2125 YWEAMEHPRFKLDEDSGMVTMRAGTRE-GRYHLRFKVYDRKHTQ-----------TDIPANVTVT 2177
Fly 2178 VR-----------EIP-----HEAVVNSGSVRLSGISDEDFI-----RVWNYRTQSMSRSKMDRF 2221
Fly 2222 RDKLADLLNT----ERENVDIFSVQL 2243 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | 37/217 (17%) |
| Cadherin_repeat | 337..396 | CDD:206637 | 20/71 (28%) | ||
| E_set | 449..541 | CDD:298831 | 21/103 (20%) | ||
| Cadherin_repeat | 549..>625 | CDD:206637 | 25/81 (31%) | ||
| Cadherin_repeat | 655..752 | CDD:206637 | 31/101 (31%) | ||
| Cadherin_repeat | 765..853 | CDD:206637 | 27/91 (30%) | ||
| Cadherin_repeat | 862..964 | CDD:206637 | 33/107 (31%) | ||
| Cadherin_repeat | 973..1074 | CDD:206637 | 36/102 (35%) | ||
| Cadherin_repeat | 1083..1166 | CDD:206637 | 25/87 (29%) | ||
| Cadherin_repeat | <1219..1298 | CDD:206637 | 23/85 (27%) | ||
| Cadherin_repeat | 1310..1414 | CDD:206637 | 37/107 (35%) | ||
| Cadherin_repeat | 1423..1514 | CDD:206637 | 25/98 (26%) | ||
| Cadherin_repeat | 1522..1630 | CDD:206637 | 29/110 (26%) | ||
| Cadherin_repeat | 1638..1741 | CDD:206637 | 38/104 (37%) | ||
| Cadherin_repeat | 1762..1861 | CDD:206637 | 27/104 (26%) | ||
| Cadherin_repeat | 1871..1966 | CDD:206637 | 29/98 (30%) | ||
| Cadherin_repeat | 1974..2083 | CDD:206637 | 28/120 (23%) | ||
| EGF | 2350..2380 | CDD:278437 | |||
| LamG | 2385..2570 | CDD:238058 | |||
| EGF_2 | <2605..2631 | CDD:285248 | |||
| Laminin_G_2 | 2665..2800 | CDD:280389 | |||
| EGF_CA | 2869..2907 | CDD:238011 | |||
| Cadherin_C | 2952..3088 | CDD:279398 | |||
| Cdh23 | XP_017169419.1 | Cadherin_repeat | 51..137 | CDD:206637 | |
| Cadherin_repeat | 145..240 | CDD:206637 | |||
| Cadherin_repeat | 249..353 | CDD:206637 | |||
| Cadherin_repeat | 361..463 | CDD:206637 | 1/8 (13%) | ||
| Cadherin_repeat | 472..564 | CDD:206637 | 17/94 (18%) | ||
| Cadherin_repeat | 573..674 | CDD:206637 | 13/111 (12%) | ||
| Cadherin_repeat | 683..781 | CDD:206637 | 24/97 (25%) | ||
| Cadherin_repeat | 789..893 | CDD:206637 | 29/130 (22%) | ||
| Cadherin_repeat | 901..997 | CDD:206637 | 19/102 (19%) | ||
| Cadherin_repeat | 1006..1105 | CDD:206637 | 31/104 (30%) | ||
| Cadherin_repeat | 1113..1210 | CDD:206637 | 30/100 (30%) | ||
| Cadherin_repeat | 1225..1315 | CDD:206637 | 27/90 (30%) | ||
| Cadherin_repeat | 1324..1421 | CDD:206637 | 33/107 (31%) | ||
| Cadherin_repeat | 1433..1530 | CDD:206637 | 36/99 (36%) | ||
| Cadherin_repeat | 1540..1637 | CDD:206637 | 31/104 (30%) | ||
| Cadherin_repeat | 1645..1747 | CDD:206637 | 31/115 (27%) | ||
| Cadherin_repeat | 1759..1854 | CDD:206637 | 37/108 (34%) | ||
| Cadherin_repeat | 1862..1962 | CDD:206637 | 25/99 (25%) | ||
| Cadherin_repeat | 1970..2072 | CDD:206637 | 29/110 (26%) | ||
| Cadherin_repeat | 2080..2176 | CDD:206637 | 38/104 (37%) | ||
| Cadherin_repeat | 2187..2296 | CDD:206637 | 29/114 (25%) | ||
| Cadherin_repeat | 2308..2405 | CDD:206637 | 29/96 (30%) | ||
| Cadherin_repeat | 2413..2511 | CDD:206637 | 27/120 (23%) | ||
| Cadherin_repeat | 2520..2614 | CDD:206637 | 16/93 (17%) | ||
| Cadherin_repeat | 2627..2725 | CDD:206637 | 18/83 (22%) | ||
| Cadherin_repeat | 2742..2848 | CDD:206637 | |||
| Cadherin_repeat | 2857..2958 | CDD:206637 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||