Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497641.2 | Gene: | cdh-1 / 187783 | WormBaseID: | WBGene00019994 | Length: | 2779 | Species: | Caenorhabditis elegans |
Alignment Length: | 2436 | Identity: | 566/2436 - (23%) |
---|---|---|---|
Similarity: | 932/2436 - (38%) | Gaps: | 535/2436 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 96 INGSSHSGAAAYHML---DTDYSKYFTVLE-DGVVMTTADISPLVNRPVQLVVVEQTPNATNTHN 156
Fly 157 LQLFVMHRNDML-RFSGSLLDASGEVRENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTII 220
Fly 221 DGNVDDAFALQERKANKNIQISAKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLD 285
Fly 286 RTVSKIQ--ITVLDENDNRPIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDAD--- 345
Fly 346 GDKIAYRLK---SPSNVVIIVPQTGEIMLAGE--PTSNELLIEVIAHDLRYPSLVSAK--PAKVL 403
Fly 404 LEFLAAEPVSFIMQHLEHDDINNHSHHREKRRVTRAVRPTKRIEFTEADGDTE----GKSVFQLE 464
Fly 465 KETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVII----------TNMGHNA 519
Fly 520 GIKY---TDNQRVI-----ILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDH 576
Fly 577 N--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEER 639
Fly 640 LSIVGG-----KRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGT 696
Fly 697 FNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDY 761
Fly 762 QAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEY--LVSDDHFAVDS-NGIIVNNKQLDADNNNAY 823
Fly 824 YEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGD 888
Fly 889 NVRFGFVGGGTSSGQFVIEDITGVIRLHNKAISLDKDKYE---LNVTA-MDDGSCCVNGDQTIHT 949
Fly 950 STAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQ 1014
Fly 1015 KGTKFTVDEETGEVSTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFD 1079
Fly 1080 RQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLKKPL 1144
Fly 1145 DGCYPRD---RYRLRVSASDKGTPASAADVDVELDVVDRNNKPP--IWDKSIYGPIHIRENVTVG 1204
Fly 1205 TVVTSVKASSGIEGNPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYESIKEY 1269
Fly 1270 NLTIRVENNGAQQLASEATVYIMLE----DVNDEIPLFTEREQETVLEGEPIGTKVTQVNAID-- 1328
Fly 1329 ---------------KDG-----TFPNNQVYY--YIVDSPRNEGKEFFEIN-LQSGEIFTK---- 1366
Fly 1367 -------------TVFDREKKGAYALEVEARDGAPSARPNSNGPNSVTKFIRIG----------- 1407
Fly 1408 ----------------IADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDHDESS---RIRY 1453
Fly 1454 EITSGNIGGAFAVKNMTGAIYVAGALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPP-V 1517
Fly 1518 FERPTYRTQITEEDDRNLPK------RVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDI 1576
Fly 1577 NRTTGEIFVL-----------------------------------KPLDRDQPNGRPQWRF---- 1602
Fly 1603 ----TVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF----GNVTENGTA---GMVVMTM 1656
Fly 1657 TA-----VDY------------DDPNEGSNARLVYSIEKNV-IEE-----ETG------------ 1686
Fly 1687 SPIFEIEPDTGVIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDINDMPPQF---TK 1748
Fly 1749 DEWFTEVDETDGTALPEMPILTVTVHDEDETNKFQYKVIDNSGYGADKFTMVRNNDGTGSLKIVQ 1813
Fly 1814 P-----LDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERANVEVS 1873
Fly 1874 VFEDTKVGTELE-----KFKA-TDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREV 1932
Fly 1933 VPRHQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPPRKVVEILATDDDD 1997
Fly 1998 RSKSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIKDH 2062
Fly 2063 GSPAMTGTSTLTVIIGDVNDNKMQPGSKDIFVYNYQGQ------SPDTPIGRVYVYDLD-----D 2116
Fly 2117 WDLPDKKFYWEAMEHPRFKLDEDSGMVTMRAGTREG-RYHLRFKVYDR--KHTQTDIPANVTV-- 2176
Fly 2177 ---------TVREIPHEAVVNSG-SVRLSGISDEDFIRVWNYRTQSMSRSK---MDRF-RDKLAD 2227
Fly 2228 LLNTERENVDIFSVQLKRKHPPLTDVRFSAH 2258 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | 36/124 (29%) |
Cadherin_repeat | 337..396 | CDD:206637 | 24/66 (36%) | ||
E_set | 449..541 | CDD:298831 | 17/113 (15%) | ||
Cadherin_repeat | 549..>625 | CDD:206637 | 20/77 (26%) | ||
Cadherin_repeat | 655..752 | CDD:206637 | 29/99 (29%) | ||
Cadherin_repeat | 765..853 | CDD:206637 | 23/90 (26%) | ||
Cadherin_repeat | 862..964 | CDD:206637 | 28/105 (27%) | ||
Cadherin_repeat | 973..1074 | CDD:206637 | 31/100 (31%) | ||
Cadherin_repeat | 1083..1166 | CDD:206637 | 26/85 (31%) | ||
Cadherin_repeat | <1219..1298 | CDD:206637 | 14/82 (17%) | ||
Cadherin_repeat | 1310..1414 | CDD:206637 | 23/172 (13%) | ||
Cadherin_repeat | 1423..1514 | CDD:206637 | 21/93 (23%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 31/156 (20%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 34/144 (24%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 21/103 (20%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 23/100 (23%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 21/108 (19%) | ||
EGF | 2350..2380 | CDD:278437 | |||
LamG | 2385..2570 | CDD:238058 | |||
EGF_2 | <2605..2631 | CDD:285248 | |||
Laminin_G_2 | 2665..2800 | CDD:280389 | |||
EGF_CA | 2869..2907 | CDD:238011 | |||
Cadherin_C | 2952..3088 | CDD:279398 | |||
cdh-1 | NP_497641.2 | Cadherin_repeat | 29..118 | CDD:206637 | 17/74 (23%) |
Cadherin_repeat | 129..229 | CDD:206637 | 36/125 (29%) | ||
Cadherin_repeat | 238..328 | CDD:206637 | 30/102 (29%) | ||
Cadherin_repeat | 459..532 | CDD:206637 | 21/83 (25%) | ||
Cadherin_repeat | 546..637 | CDD:206637 | 29/97 (30%) | ||
Cadherin_repeat | 645..733 | CDD:206637 | 23/92 (25%) | ||
Cadherin_repeat | 746..833 | CDD:206637 | 28/104 (27%) | ||
Cadherin_repeat | 843..938 | CDD:206637 | 31/98 (32%) | ||
Cadherin_repeat | 947..1041 | CDD:206637 | 30/102 (29%) | ||
Cadherin_repeat | 1051..1136 | CDD:206637 | 20/101 (20%) | ||
Cadherin_repeat | 1337..1426 | CDD:206637 | 21/92 (23%) | ||
Cadherin_repeat | 1445..>1515 | CDD:206637 | 20/74 (27%) | ||
Cadherin_repeat | 1638..1723 | CDD:206637 | 27/86 (31%) | ||
Cadherin_repeat | 1734..1817 | CDD:206637 | 23/112 (21%) | ||
Cadherin_repeat | 1836..1923 | CDD:206637 | 23/93 (25%) | ||
Cadherin_repeat | 1934..2025 | CDD:206637 | 21/105 (20%) | ||
Cadherin_repeat | 2034..2120 | CDD:206637 | 20/92 (22%) | ||
Cadherin_repeat | 2135..2226 | CDD:206637 | 21/84 (25%) | ||
Cadherin_repeat | 2235..2330 | CDD:206637 | |||
Cadherin_repeat | 2345..2437 | CDD:206637 | |||
Cadherin_repeat | 2446..2534 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |