Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317871.1 | Gene: | cdh-4 / 175590 | WormBaseID: | WBGene00000396 | Length: | 4328 | Species: | Caenorhabditis elegans |
Alignment Length: | 3955 | Identity: | 789/3955 - (19%) |
---|---|---|---|
Similarity: | 1287/3955 - (32%) | Gaps: | 1430/3955 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 IFLISLPFILAIEETTFAGLSAENAARMLAGSPGDVEKSSLSH-HSEM------SLVLPHDTYPG 83
Fly 84 ----FSIKKFKTHPVKI----NGSSHSGAA---AYHMLDTDYSKYFTVLEDGVVMTTADISPLVN 137
Fly 138 RPVQ---LVVVEQTPNATNTHNLQLFVMHRNDMLRFSGSLLDAS------------GEVRENQPA 187
Fly 188 GTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQISAKSLVINGDD 252
Fly 253 ESGVWLVTN--RPLDREERAHYDLSVEASDVDGLDRTVSK--IQITVLDENDNRPIFKSLDYKFA 313
Fly 314 I----AGQ------KSASMESNSSVTYQ------RFAI--------------------------- 335
Fly 336 -----------------------------------------------------MGKVEATDADGD 347
Fly 348 KIAYRLKS--PSNVVIIVPQTGEIMLA--------GEPTSNELLIEVIAHD-----LRYPSLVSA 397
Fly 398 KPAKVLLEFLAAEPVSFIMQHLEHDDINNHSHHREKRRVTRAVRPTKRIEFTEADGDTEGKS--V 460
Fly 461 FQLEKETDKETFKIRDDNPWVTVE-------TNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHN 518
Fly 519 AGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYF 581
Fly 582 IVRDRTGGRFEVDERSGVVR-TRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGG 645
Fly 646 KRAPQ---FYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVK 707
Fly 708 LAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPL 772
Fly 773 GTSILR-------VKAMDSDSGSNAEIEYLV----SDDHFAVDS-NGIIVNNKQLDADNNNAYYE 825
Fly 826 FIVTAKDKGEPPKSGV--ATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGD 888
Fly 889 NVRFGFVGGGTSSGQFVIEDITGVIR--LHNKAISLDKDKYELNVTAMDDGSCCVNGDQTIHTST 951
Fly 952 AVVVVFITDVNDNKPVFKDCST--------------YYPKVEEGA--PNGSPVIKVVATDEDKGV 1000
Fly 1001 NGQVKYSIVQQPNQKGTKFTVDEETGEVSTNKV-FDREGDDGKFVSVTVKATDQGDPSLEGVCSF 1064
Fly 1065 TVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYF 1129
Fly 1130 EIQAESGWIVLKKPLDGCYPRD-RYRLRVSASDKGTPASAADVDVELDVVDRNNKPPIWDKSIYG 1193
Fly 1194 PIHIRENVTVGTVVTSVKASSGIEGNP--TVFYRLM----PGST---------------AQTNKF 1237
Fly 1238 HTFYLQQR------------------------------------------------------PDN 1248
Fly 1249 GDT----------------WADIKVNHPLDYESIKEYNLTIRVENNGAQQLASEATVYIMLEDVN 1297
Fly 1298 DEIPLFTEREQETVLEGEPI-GTKVTQVNAIDKDGT----FPNNQVYYYIVDSPRNEGKE-FFEI 1356
Fly 1357 NLQSGEIFTKTVFDRE-------KKGAYALEVEARDGAPSARPNSNGPNSVTKFIRIGIADKNDN 1414
Fly 1415 PPYFDKSLYEAEVDENEDI-QHTVLTVTAKDHDESSRIRYEI---TSGNIGGA-----FAVKNMT 1470
Fly 1471 GAIYVAGALDYETRRRYELRLAASDNL-KENYTTVIIHVKDVNDNPPVFERPTYRTQITE---ED 1531
Fly 1532 DRNLPKRVLQVTATDGDK--------------------------------DRPQNIVYFLTGQGI 1564
Fly 1565 DPDNP----------------------ANS----------------------------------- 1572
Fly 1573 ---------KFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDIN 1628
Fly 1629 DNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIE 1693
Fly 1694 PDTGVIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDET 1758
Fly 1759 DGTALPE-MPILTVTVHDEDET-----------------------------------NKFQYK-- 1785
Fly 1786 ------VIDNS--------------------------GYGADKFTMV---------------RNN 1803
Fly 1804 DG--------TGSLKIVQ--PLDYEDQLQSNGFRFRIQVNDK----------------------- 1835
Fly 1836 ------------------------GEDNDND--KYHVAYSW------------------------ 1850
Fly 1851 -------------------VVVKLRDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGG 1896
Fly 1897 KSKVSYSIDRSSDRQRQFAIN-QNGSVTIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIV 1960
Fly 1961 QDINDNAPKFLKD-YRPVLPEHVPP-RKVVEILATDDD--------------DRSKSNGPPFQFR 2009
Fly 2010 LDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLT 2074
Fly 2075 VIIGDVNDN-------------------------------------------------------- 2083
Fly 2084 --------KMQPGSKD-----IFVYNYQGQSPDTP------------------------------ 2105
Fly 2106 ---IGRVYVYDLDDWDLPDKKFYWEAMEHPRFKLDEDSGMVTMRAGTREGRYHLRFKV------- 2160
Fly 2161 -YDRKHTQTDIPANVTVT-------------VREIPHEAVVNSGSVRLSGISDEDFIRVWNYRTQ 2211
Fly 2212 SMSRSKMDRFRDKLADLLN-TERENVDIFSVQL--------KRKHPPLTDVRF-----SAHGSPY 2262
Fly 2263 YKPVRL-----NGIVLMHREEIEKDVGINITMVGIDECLYENQMCEGSCTNSLEISPLPY-MVNA 2321
Fly 2322 NKTALVGVRVDTIADCTC-----GARNFTKPESCRTTPCHNGGRCVDTRFGP--HCSCPVGYTGP 2379
Fly 2380 RC------------QQTTRSFRGNGWAWYPPLEMCDE----SHLSLEFITRKPDGLIIYNGPIVP 2428
Fly 2429 PERDETLISDFIALELERGYPRLLIDFGSGTLELRVKTKKT-LDDGEWHRIDLFWDTESIRMVVD 2492
Fly 2493 FCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNAPLQVGGLYREQFDQSLYFWHYMPTA 2557
Fly 2558 KGFDGCIRNLV----------HNSKLYDLAHPGLSRNSVAGCPQTEEVCAQTETTARCWEHGNCV 2612
Fly 2613 G-SLSEARCHCRPGWTGPACNIPTIPTTFKAQSYVKYALSFEPDRFSTQVQLRFRTREEYGELFR 2676
Fly 2677 VSDQHNREYGILEIKDGHLHFRYNLNSLRTEEKDLWLNAIVVNDGQWHVVKVNRYGSAATLELDG 2741
Fly 2742 GEGRRYNETFEFVGHQWLLVDKQEGVYAGGKAEYTGVRTFEVYADYQKSCLDDIRLEGKHLPLPP 2806
Fly 2807 AMNGTQWGQATMARNLEKGCPSNKPCSNVICPDPFECVDLWNVYECTCGEGRIMSPDSKGCMDR- 2870
Fly 2871 ------NECLDMPCMNGATCINLEPR-----LRYRCICPDGF-----WGENCELVQEGQTLKLSM 2919
Fly 2920 GALAAILVCLLIILILVLVFVVYNRRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPL 2984
Fly 2985 QIPIGGPMPPELAPMKMPIMYPVMTLMPGQEPNVGMFIE------EHKKRADGDPNAPPFDDLRN 3043
Fly 3044 YAYEGGGSTAGS--------------------------------LSSLASGTD---------DEQ 3067
Fly 3068 QEY----------------------DYLGAWGPRFDKLANMYGPEAPNPHNTELE 3100 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | 32/138 (23%) |
Cadherin_repeat | 337..396 | CDD:206637 | 21/73 (29%) | ||
E_set | 449..541 | CDD:298831 | 22/100 (22%) | ||
Cadherin_repeat | 549..>625 | CDD:206637 | 20/78 (26%) | ||
Cadherin_repeat | 655..752 | CDD:206637 | 19/96 (20%) | ||
Cadherin_repeat | 765..853 | CDD:206637 | 28/101 (28%) | ||
Cadherin_repeat | 862..964 | CDD:206637 | 20/103 (19%) | ||
Cadherin_repeat | 973..1074 | CDD:206637 | 28/117 (24%) | ||
Cadherin_repeat | 1083..1166 | CDD:206637 | 22/83 (27%) | ||
Cadherin_repeat | <1219..1298 | CDD:206637 | 28/169 (17%) | ||
Cadherin_repeat | 1310..1414 | CDD:206637 | 27/116 (23%) | ||
Cadherin_repeat | 1423..1514 | CDD:206637 | 26/100 (26%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 39/208 (19%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 28/102 (27%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 37/285 (13%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 28/95 (29%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 26/123 (21%) | ||
EGF | 2350..2380 | CDD:278437 | 9/31 (29%) | ||
LamG | 2385..2570 | CDD:238058 | 41/199 (21%) | ||
EGF_2 | <2605..2631 | CDD:285248 | 7/26 (27%) | ||
Laminin_G_2 | 2665..2800 | CDD:280389 | 2/134 (1%) | ||
EGF_CA | 2869..2907 | CDD:238011 | 11/54 (20%) | ||
Cadherin_C | 2952..3088 | CDD:279398 | 33/204 (16%) | ||
cdh-4 | NP_001317871.1 | Cadherin_repeat | 160..254 | CDD:206637 | |
CA | 416..490 | CDD:214520 | |||
Cadherin_repeat | 506..570 | CDD:206637 | |||
Cadherin_repeat | 615..716 | CDD:206637 | |||
Cadherin_repeat | 724..822 | CDD:206637 | |||
Cadherin_repeat | 832..925 | CDD:206637 | 15/49 (31%) | ||
Cadherin_repeat | 940..1042 | CDD:206637 | 21/109 (19%) | ||
Cadherin_repeat | 1051..1152 | CDD:206637 | 32/127 (25%) | ||
Cadherin_repeat | 1175..1235 | CDD:206637 | 7/59 (12%) | ||
Cadherin_repeat | 1269..1353 | CDD:206637 | 21/83 (25%) | ||
Cadherin_repeat | 1367..1463 | CDD:206637 | 26/129 (20%) | ||
Cadherin_repeat | 1473..1562 | CDD:206637 | 23/94 (24%) | ||
Cadherin_repeat | 1674..1779 | CDD:206637 | 29/106 (27%) | ||
Cadherin_repeat | 1887..1979 | CDD:206637 | 26/102 (25%) | ||
Cadherin_repeat | 1988..2075 | CDD:206637 | 24/97 (25%) | ||
Cadherin_repeat | 2085..2176 | CDD:206637 | 17/92 (18%) | ||
Cadherin_repeat | 2191..2280 | CDD:206637 | 18/89 (20%) | ||
Cadherin_repeat | 2291..2386 | CDD:206637 | 25/107 (23%) | ||
CA | <2449..2503 | CDD:214520 | 16/53 (30%) | ||
Cadherin_repeat | 2510..2598 | CDD:206637 | 17/92 (18%) | ||
Cadherin_repeat | 2612..2708 | CDD:206637 | 20/100 (20%) | ||
Cadherin_repeat | 2718..2808 | CDD:206637 | 28/100 (28%) | ||
Cadherin_repeat | 2817..2903 | CDD:206637 | 14/91 (15%) | ||
Cadherin | 2941..3009 | CDD:421759 | 13/67 (19%) | ||
Cadherin_repeat | 3018..3109 | CDD:206637 | 8/90 (9%) | ||
Cadherin_repeat | 3117..3212 | CDD:206637 | 28/97 (29%) | ||
Cadherin_repeat | 3221..3322 | CDD:206637 | 26/123 (21%) | ||
Cadherin_repeat | 3332..3418 | CDD:206637 | 6/85 (7%) | ||
Cadherin_repeat | 3440..3536 | CDD:206637 | 27/105 (26%) | ||
EGF | 3710..3749 | CDD:238010 | 10/38 (26%) | ||
LamG | 3781..3907 | CDD:214598 | 36/166 (22%) | ||
EGF | 3933..3963 | CDD:394967 | 7/40 (18%) | ||
EGF_CA | 3968..4004 | CDD:238011 | 13/157 (8%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I7515 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |