DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and LOC1270327

DIOPT Version :10

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:XP_061502466.1 Gene:LOC1270327 / 1270327 VectorBaseID:AGAMI1_000178 Length:1047 Species:Anopheles gambiae


Alignment Length:1676 Identity:342/1676 - (20%)
Similarity:536/1676 - (31%) Gaps:748/1676 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   947 IHTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQ 1011
            ||........|...|| :||.|.:|..|.|.::|....|:.|::|.|||.|:  :..:||||:.:
Mosquito    17 IHCHCLAAADFNAPVN-HKPSFHNCGEYKPTLKEEQEPGTSVLRVAATDPDQ--SQTIKYSILNE 78

  Fly  1012 PNQKGTKFTVDEETGEVSTNKVFDREGD--DGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDN 1074
            ..::.. |.:||:|||:.:..:|||:..  |.:|. :||:|||.|.|||:.||:..|.|.|:|||
Mosquito    79 MREERV-FAIDEDTGEIFSAYIFDRDPPYRDTEFY-ITVRATDNGQPSLDDVCTIKVTILDINDN 141

  Fly  1075 PPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIV 1139
            ||:||:..|...|..:.::...:..::|.|.|...|..:.:.:...:  .|..||||...:|.:.
Mosquito   142 PPVFDKDFYEAFVSMNTTLRQQVTIITAKDIDEQTNNVVNFEIVEEY--KDSSYFEIDQHTGVLT 204

  Fly  1140 LKKPLDGCYPRDRYRLRVSASDKG---TPASAADVDVELDVVDRNNKPPIWDKSIYGPIHIRENV 1201
            |.|.:|. .|.:.|.|||.|.::|   ..:...:|||::.::|.:.:.|.:.|....|:.:.||.
Mosquito   205 LAKRIDR-NPGEYYALRVRAYNQGYIENESENPEVDVKVHIIDDDKRLPYFTKVPEVPVILHENF 268

  Fly  1202 TVGTVVTSV-KASSGIEGNPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYES 1265
            |....:.:| :|:|....:..|.:.::.|...|||..|||.|:|.    :..|.||:...||||.
Mosquito   269 TAFDQILAVFEANSNTNNDSNVIFEIVRGKFEQTNSLHTFLLEQI----NHTAHIKLARALDYER 329

  Fly  1266 IKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEPI-GTKVTQVNAIDK 1329
            |.||.:|:|..|.  ..||:||.|.||:.||||.:||..  |..:.||.|.| .|.|.|::|.|.
Mosquito   330 ITEYTITVRATNR--HDLATEAVVKIMILDVNDNVPLIV--EAVSYLEHELIDNTPVIQIHAYDL 390

  Fly  1330 DGTFPNNQVYYYIVDSPRNEGKEFFEINLQSGEIFTKTVFDREKKGAYALEVEARDGAPSARPNS 1394
            |||..||.:.|.|.:|    .:..|.|:..:|.:..:...:.::|..|.:::.|:|.||||...:
Mosquito   391 DGTSANNIISYSIAES----NQLHFTIDSHTGTVTKQNRLNDDEKDIYFIKILAKDNAPSALFRN 451

  Fly  1395 NGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDHDESSRIRYEITSGN 1459
            |.||..:                                 ||::                     
Mosquito   452 NKPNMSS---------------------------------HTLI--------------------- 462

  Fly  1460 IGGAFAVKNMTGAIYVAGALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYR 1524
                                                            ||.:|            
Mosquito   463 ------------------------------------------------VKIIN------------ 467

  Fly  1525 TQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPL 1589
                                                                             
Mosquito   468 ----------------------------------------------------------------- 467

  Fly  1590 DRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVM 1654
                                               :|:|    |.||                  
Mosquito   468 -----------------------------------RDLN----IIPQ------------------ 475

  Fly  1655 TMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDYSIQVV 1719
                          ||                                                 
Mosquito   476 --------------NA------------------------------------------------- 477

  Fly  1720 AMDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPILTVTVHDEDETNKFQY 1784
                                                                             
Mosquito   478 ----------------------------------------------------------------- 477

  Fly  1785 KVIDNSGYGADKFTMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYS 1849
                           :.|..|            ::|..|||..|:                    
Mosquito   478 ---------------ITNIHG------------QEQRTSNGISFQ-------------------- 495

  Fly  1850 WVVVKLRDINDNKPHFERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVSYSIDRSSDRQRQF 1914
                                                                             
Mosquito   496 ----------------------------------------------------------------- 495

  Fly  1915 AINQNGSVTIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLP 1979
                                                               ||.:..|.|.    
Mosquito   496 ---------------------------------------------------NALRISKSYE---- 505

  Fly  1980 EHVPPRKVVEILATDDDDRSKSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRS 2044
                                                         |:|                 
Mosquito   506 ---------------------------------------------ERD----------------- 508

  Fly  2045 FDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIGRV 2109
                         |..|                            :.|.|:||:|...|..||.|
Mosquito   509 -------------VFND----------------------------RFIMVHNYEGTLTDKLIGSV 532

  Fly  2110 YVYDLDDWDLPDKKFYWE------AMEHPRFKLDEDSGMVTMRAGTREGRYHLRFKVYDRK--HT 2166
            | :|.|..|..:|.|.|:      ..:|  |||:..|||:.|..||.||.|:|.|.|.:..  .:
Mosquito   533 Y-FDYDIEDNSNKLFLWDERASTGTRKH--FKLNSKSGMIMMLKGTPEGIYNLEFTVIEESSDFS 594

  Fly  2167 QTDIPANVTVTVREIPHEAVVNSGSVRLSGISDEDFIRVWNYRTQSMSRSKMDRFRDKLADLLNT 2231
            :..:.|.|||||:.|..:.|..|||:|...::.|.||.    :|.|...:.|.|.::.:|.:|:|
Mosquito   595 RHKVSARVTVTVKNISTKTVNQSGSIRFYNVTAEKFIS----QTLSELNTPMYRLQESIASILDT 655

  Fly  2232 ERENVDIFSVQLKRKHPPLT-----DVRFSAHGSPYYKPVRLNGIVLMHREEIEKDVGINITMVG 2291
            ..:.||||::..::    ||     ||.|:...:.|.....||.::.:|..::|:|||..|..||
Mosquito   656 NPDKVDIFTINNRK----LTRGAFLDVFFAVDDTIYTSSEVLNAVLSLHLRKLEEDVGYRIVSVG 716

  Fly  2292 IDECLYENQMCEGSCTNSLEISPLPYMVNANKTALVGVRVDTIADCTCGARNFTKPE-SCRTTPC 2355
            ||||:.:..||:.:|.|.:..|..|.:|:.|.::.||:.....|.|.        |: ......|
Mosquito   717 IDECIAKGHMCKQACKNRVHRSQKPIVVHTNTSSFVGMTTLVQAQCI--------PQIESSLVAC 773

  Fly  2356 HNGGRCVDTRFGPHCSCPVGYTGPRCQQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKPDGLI 2420
            .|||    |.....|:||:|:.||:|::....|.|:|:|.||.:...:.:::|:..:.|:.|||:
Mosquito   774 LNGG----TFQNGKCNCPMGFEGPQCEKLDICFDGSGYAIYPLINSGNVNNISIGLLPRQKDGLV 834

  Fly  2421 IYNGPI-------VPPERDETLISDFIALELERGYPRLLIDFGSGTL-----ELRVKTKKTLDDG 2473
            .|.||:       .||         |:|||:..|...||:|:|:|.:     :|.:.|..|:|..
Mosquito   835 FYMGPLKYDPSLKTPP---------FLALEINDGMLVLLLDYGTGMIRFEHQQLILHTVTTVDIV 890

  Fly  2474 -EWHRIDLFWDTESIRMVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNAPLQVG 2537
             |.||.::...:..::                        .|.::|.:......:|..|.|:.:|
Mosquito   891 LEPHRFEIHTASNKLK------------------------GSSRSRYENKDLRGFLPGNMPILLG 931

  Fly  2538 GLYREQFDQSLYFW--HY--MPTAKGFDGCIRNLVHNSKLYDLAHPGLSRN 2584
            |.........||.|  |.  :|....:|||:|.|..|..:.|...|.:..|
Mosquito   932 GTINHFAKGLLYNWPLHLVGIPQTIDYDGCMRKLTINGHMIDFMLPIVENN 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
CA_like 449..541 CDD:481204
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637
Cadherin_repeat 765..853 CDD:206637
Cadherin_repeat 862..964 CDD:206637 5/16 (31%)
Cadherin_repeat 973..1074 CDD:206637 40/102 (39%)
Cadherin_repeat 1083..1166 CDD:206637 22/85 (26%)
Cadherin_repeat <1219..1298 CDD:206637 32/78 (41%)
Cadherin_repeat 1310..1414 CDD:206637 31/104 (30%)
Cadherin_repeat 1423..1514 CDD:206637 5/90 (6%)
Cadherin_repeat 1522..1630 CDD:206637 2/107 (2%)
Cadherin_repeat 1638..1741 CDD:206637 2/102 (2%)
CA 1770..1863 CDD:214520 7/92 (8%)
Cadherin_repeat 1871..1966 CDD:206637 0/94 (0%)
Cadherin_repeat 1974..2083 CDD:206637 5/108 (5%)
EGF 2350..2380 CDD:394967 10/29 (34%)
LamG 2385..2570 CDD:238058 50/201 (25%)
EGF_2 2605..2631 CDD:400365
LamG 2637..2797 CDD:238058
EGF_CA 2869..2907 CDD:238011
CADH_Y-type_LIR 3029..3088 CDD:460041
LOC1270327XP_061502466.1 None
Blue background indicates that the domain is not in the aligned region.

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