Sequence 1: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038954289.1 | Gene: | Cdh23 / 114102 | RGDID: | 619760 | Length: | 3352 | Species: | Rattus norvegicus |
Alignment Length: | 2432 | Identity: | 652/2432 - (26%) |
---|---|---|---|
Similarity: | 986/2432 - (40%) | Gaps: | 446/2432 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 EMSLVLPHDTYPGFSIKKFKTHPVKINGSSHSGAAAYHMLDTDYS-------KY--------FTV 120
Fly 121 LED-GVVMTTADIS-PLVNRPVQLVVVEQTPNATNTHNLQLFVMHRNDML-RFSGSLLDA-SGEV 181
Fly 182 RENQPAGT---RVRGVPLMQAFSGSILDEELATPKKVRYTII---------DGNVDDAFAL---- 230
Fly 231 ----QERKAN-----------------------------------------------KNIQISAK 244
Fly 245 SLVINGDD---------ESGVW----------------LVTNRPLDREERAHYDLSVEASD--VD 282
Fly 283 GLDRT-VSKIQITVLDENDNRPIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDAD- 345
Fly 346 GDK--IAYRLKSPSNVVIIVPQTGEI-----MLAGE---PTSNELLIEVIAH--DLRYPSLVSAK 398
Fly 399 PAKVLLEFLAAEPVSFIMQHLEHDDINNHSHHREKRRVTRAVRPT-KRIEFTE--ADGDTEGKSV 460
Fly 461 FQL------EKETDKETFKIRDDNP---WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMG 516
Fly 517 HNAGI-KYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--I 578
Fly 579 HYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDME----YVLYVKAEDQNGKVDDRRFQSTPEER 639
Fly 640 LSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADRE---IRYTLKAQGQGAGTFNIG 700
Fly 701 PTSG-IVKLAKELDFEDLRQPHVYSLIVTA-TEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQA 763
Fly 764 HNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLV---SDDHFAVD-SNGIIVNNKQLDADNNNAYY 824
Fly 825 EFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDN 889
Fly 890 ---VRFGFVGGGTSSGQFVIEDITGVIRLHNKAISLDKDK---YELNVTAMDDGSCCVNGDQTIH 948
Fly 949 TSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPN 1013
Fly 1014 QKGT--KFTVDEETGEVSTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPP 1076
Fly 1077 LFDRQ-KYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVL 1140
Fly 1141 KKPLDGCYPRDR-----YRLRVSASDKGTPASAADVDVELDVVDRNNKPPIWDKSIYGPIHIREN 1200
Fly 1201 VTVGTVVTSVKASSGIEG-NPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYE 1264
Fly 1265 -SIKEYNLTIRVENNG---AQQLASEATVYIMLEDVNDEIPLFTEREQE---TVLEGEPIGTKVT 1322
Fly 1323 QVNAIDKDGTFPNNQVYYYIVD-SPRNEGKEFFEINLQSGEIFTK--TVFDREKKGAYALEVEAR 1384
Fly 1385 D-GAPSARPNSNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDHDE- 1447
Fly 1448 -SSRIRYEITSGNIGGAFAVKNMTGAIYVAGALDYETRRRYELRLAASDN------LKENYTTVI 1505
Fly 1506 IHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQ--VTATDGDKDRPQNIVYFLTGQGIDPDN 1568
Fly 1569 PANSKFDINRTTGEIFVLKP--LDRD--QPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDIND 1629
Fly 1630 NAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEP 1694
Fly 1695 DTGVIKTAVCCLDRERTPDYSIQVVAMDGG--GLKGTGTASIRVKDINDMPPQFTKD-EWFTEVD 1756
Fly 1757 ETDGTALPEMPILTVTVHDEDETNKFQYKVI------DNSGYGADKFTMVRNNDGTGSLKIVQPL 1815
Fly 1816 DYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERANVEV---SVFED 1877
Fly 1878 TKVGTELEKFKATDPDQGGKSKVSYS-IDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQVKIL 1941
Fly 1942 AIDDGSPPKTATATLTVIVQDINDNAPKFLK-DYRPVLPEHVPPRKVV-EILATDDD-------D 1997
Fly 1998 RSKSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIKDH 2062
Fly 2063 GSPAMTG--TSTLTVIIG--DVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDDWDLPDKK 2123
Fly 2124 FYWEAMEHPRFKLDEDSGMVTMRAGTRE-GRYHLRFKVYDRKHTQ-----------TDIPANVTV 2176
Fly 2177 TVR-----------EIP-----HEAVVNSGSVRLSGISDEDFI-----RVWNYRTQSMSRSKMDR 2220
Fly 2221 FRDKLADLLNT----ERENVDIFSVQL 2243 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | 41/217 (19%) |
Cadherin_repeat | 337..396 | CDD:206637 | 20/71 (28%) | ||
E_set | 449..541 | CDD:298831 | 22/103 (21%) | ||
Cadherin_repeat | 549..>625 | CDD:206637 | 25/81 (31%) | ||
Cadherin_repeat | 655..752 | CDD:206637 | 30/101 (30%) | ||
Cadherin_repeat | 765..853 | CDD:206637 | 27/91 (30%) | ||
Cadherin_repeat | 862..964 | CDD:206637 | 34/107 (32%) | ||
Cadherin_repeat | 973..1074 | CDD:206637 | 35/102 (34%) | ||
Cadherin_repeat | 1083..1166 | CDD:206637 | 25/87 (29%) | ||
Cadherin_repeat | <1219..1298 | CDD:206637 | 22/82 (27%) | ||
Cadherin_repeat | 1310..1414 | CDD:206637 | 37/107 (35%) | ||
Cadherin_repeat | 1423..1514 | CDD:206637 | 25/98 (26%) | ||
Cadherin_repeat | 1522..1630 | CDD:206637 | 31/113 (27%) | ||
Cadherin_repeat | 1638..1741 | CDD:206637 | 39/104 (38%) | ||
Cadherin_repeat | 1762..1861 | CDD:206637 | 25/104 (24%) | ||
Cadherin_repeat | 1871..1966 | CDD:206637 | 29/98 (30%) | ||
Cadherin_repeat | 1974..2083 | CDD:206637 | 29/120 (24%) | ||
EGF | 2350..2380 | CDD:278437 | |||
LamG | 2385..2570 | CDD:238058 | |||
EGF_2 | <2605..2631 | CDD:285248 | |||
Laminin_G_2 | 2665..2800 | CDD:280389 | |||
EGF_CA | 2869..2907 | CDD:238011 | |||
Cadherin_C | 2952..3088 | CDD:279398 | |||
Cdh23 | XP_038954289.1 | Cadherin_repeat | 42..128 | CDD:206637 | |
Cadherin_repeat | 136..231 | CDD:206637 | |||
Cadherin_repeat | 240..344 | CDD:206637 | |||
Cadherin_repeat | 352..454 | CDD:206637 | 1/8 (13%) | ||
Cadherin_repeat | 463..555 | CDD:206637 | 17/94 (18%) | ||
Cadherin_repeat | 564..665 | CDD:206637 | 16/111 (14%) | ||
Cadherin_repeat | 674..772 | CDD:206637 | 25/97 (26%) | ||
Cadherin_repeat | 780..884 | CDD:206637 | 29/130 (22%) | ||
Cadherin_repeat | 892..988 | CDD:206637 | 20/102 (20%) | ||
Cadherin_repeat | 997..1096 | CDD:206637 | 31/104 (30%) | ||
Cadherin_repeat | 1104..1201 | CDD:206637 | 29/100 (29%) | ||
Cadherin_repeat | 1216..1306 | CDD:206637 | 27/90 (30%) | ||
Cadherin_repeat | 1315..1412 | CDD:206637 | 34/107 (32%) | ||
Cadherin_repeat | 1424..1521 | CDD:206637 | 35/99 (35%) | ||
Cadherin_repeat | 1531..1628 | CDD:206637 | 31/104 (30%) | ||
Cadherin_repeat | 1636..1738 | CDD:206637 | 31/112 (28%) | ||
Cadherin_repeat | 1750..1845 | CDD:206637 | 37/108 (34%) | ||
Cadherin_repeat | 1853..1953 | CDD:206637 | 25/99 (25%) | ||
Cadherin_repeat | 1961..2063 | CDD:206637 | 31/113 (27%) | ||
Cadherin_repeat | 2072..2167 | CDD:206637 | 39/103 (38%) | ||
Cadherin_repeat | 2178..2287 | CDD:206637 | 26/115 (23%) | ||
Cadherin_repeat | 2299..2396 | CDD:206637 | 29/96 (30%) | ||
Cadherin_repeat | 2404..2502 | CDD:206637 | 28/120 (23%) | ||
Cadherin_repeat | 2511..2605 | CDD:206637 | 16/93 (17%) | ||
Cadherin_repeat | 2618..2716 | CDD:206637 | 18/83 (22%) | ||
Cadherin_repeat | 2733..2839 | CDD:206637 | |||
Cadherin_repeat | 2848..2949 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |