DRSC/TRiP Functional Genomics Resources

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Protein Alignment CadN and LOC100494953

DIOPT Version :9

Sequence 1:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster
Sequence 2:XP_031759339.1 Gene:LOC100494953 / 100494953 -ID:- Length:2999 Species:Xenopus tropicalis


Alignment Length:2800 Identity:987/2800 - (35%)
Similarity:1465/2800 - (52%) Gaps:301/2800 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 RRVTRAVRP-------TKRIEFTEADGDTEGKSVFQL-EKETDKETFKIR-DDNPWVTVETNGA- 488
            ||..|::.|       |.|:....|.|:|    :|.: ::....:.|:|. ..:|.|.:|:... 
 Frog   365 RRSVRSLLPSAFSCSHTVRVPAVGALGET----IFIVPDRRYRGKWFEISWPPDPPVRIESGSGR 425

  Fly   489 -------------VRVKKKWDYEELGPEKTIDFWVI-ITNMGHNAGIKYTDNQRVIILVKDVNDE 539
                         |:||.:      ..||..|:::. ||                |::.|:.:.|
 Frog   426 VYLTHRLQGGQTEVQVKVR------NLEKDSDWYLCHIT----------------IVVPKEESLE 468

  Fly   540 PPYFINRPLPMQAVVQLNAPPNTPVFTLQA---RDPDTDHNIHYFIVRDRTGGRFEVDERSGVVR 601
            ...:   |.|..|.|...||..|||:.|.|   .|..:...|.|::: :....|||||:.:|.:|
 Frog   469 WAMY---PFPYLACVDAEAPKGTPVYQLLAHYYNDESSSSGISYYLM-EGADQRFEVDKDTGAIR 529

  Fly   602 TRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKK 666
            |.|..| ..:.|:.|.|:|.|:.||       .:|...:||:.|.|.|||...:|...:||:...
 Frog   530 TTGLPL-AWNKEHALTVQATDKRGK-------KSPYASISILVGSRPPQFTNMTYSLYVPESTAV 586

  Fly   667 DSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE 731
            ...|..::|.||.::.|.|.|..  ..:|.|.|...||.:.|...:|:|.  :.|:|.|:|.|.|
 Frog   587 GEKIAVVEAVSFQNKRISYFLLM--NPSGLFAITQESGELSLTHAVDYES--EHHLYHLLVKALE 647

  Fly   732 DSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLV 796
            ...|.|:..::.|.:||.||.:|:|....|...::.|.||:|||:|:|.|.|.||||||||.|..
 Frog   648 MDSGLSSVTEVMIHITDDNDCSPEFLQSIYSRDSILETIPVGTSLLQVLAQDCDSGSNAEISYYT 712

  Fly   797 SDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQ 861
            ....|:|...|:|.:::.|:.:..|..|||:|.|.|.|:||.:|.|:||:...|.|||.|.|||.
 Frog   713 QSLEFSVTPQGVIHSSQLLNYERANHMYEFVVVAVDSGKPPLTGTASVRLRMANVNDEAPVFSQT 777

  Fly   862 VYTPNVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTSSGQFVIEDITGVIRL-HNKAISLDKD 925
            ||...:.|:||.:|||.||.|.|.|||.|.:..| ||...|.|.:::..|:::| ......|.|.
 Frog   778 VYNTFLSEDAGADTLVATVHAKDPDGDGVTYVIV-GGNEEGNFELDNQKGILKLSKTPRPKLMKR 841

  Fly   926 KYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTY--YPKVEEGAPNGSPV 988
            :|.|||:|:||.:.  .|..::.:.|. |||.|.|||||||||::|:.|  ...|.|..|.|:.|
 Frog   842 QYLLNVSAIDDNAS--GGPSSLRSFTQ-VVVGIYDVNDNKPVFRECAQYSEVTSVLENQPPGTFV 903

  Fly   989 IKVVATDEDKGVNGQVKYSIVQQPNQKGTK--FTVDEETGEVSTNKVFDREGDDGKFVSVTVKAT 1051
            ::|.|.|.|.|:|||||||::   :::||:  |::|.:||.::|.:.||||..  :..|::|.||
 Frog   904 LQVEAHDADSGLNGQVKYSLM---HREGTRLAFSIDPDTGLITTLQSFDREKQ--REYSISVIAT 963

  Fly  1052 DQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYS 1116
            ||....|.|:|..|:.|.|:|||.|.|:..:|...:::|..:||:.||.:|.|:|...|.||.||
 Frog   964 DQAQEPLIGICQVTIHIADINDNDPKFENSRYQYFLREDTPVGTSFLRATALDDDQGVNAAINYS 1028

  Fly  1117 LTAPFNPNDLEYFEIQAESGWIVLKKPLDGCYPRDRYRLRVSASDKGTPASAADVDVELDVVDRN 1181
            : |...|   |||.|...:||:.:.:|:.......|:   :.|:|.|..:|    :|||.|...|
 Frog  1029 I-AQQQP---EYFRINPSTGWVYVNQPISQTSLITRH---IVATDGGNRSS----NVELTVTVTN 1082

  Fly  1182 --NKPPIWDKSIYGPIHIRENVTVGTVVTSVKASSGIEGNPTVFYRLMPGSTAQTNKFHTFYLQQ 1244
              |:||.|::|.|. :.:.|:|...|.:.:|||.|. .|:|.|.|.:..|..::||....|||  
 Frog  1083 VLNQPPQWEQSKYW-VSVPEDVARDTKIVTVKAVSP-RGDPRVTYNMEDGLVSETNNPIRFYL-- 1143

  Fly  1245 RPDNGDTWADIKVNHPLDYESIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQE 1309
            :|:...:.|.:.|:.|||||:.:.:.|.||.:|..|..|||.|.||:.:.||||.:|.||....|
 Frog  1144 KPNRSGSSASVLVSEPLDYEATQFFTLKIRAQNVAAVPLASFAIVYVNVTDVNDNVPFFTSSAYE 1208

  Fly  1310 -TVLEGEPIGTKVTQVNAIDKDGTFPNNQVYYYIVDSPRNEGKEFFEINLQSGEIFTKTVFDREK 1373
             ||.||..|.|.|.||.|.|.|........|..:.|.  :|..:||.|:.:||.|:|::.|||||
 Frog  1209 VTVPEGAEIDTSVAQVLATDLDSGLHGKVTYVILRDG--SEDHKFFSIDSESGVIYTRSTFDREK 1271

  Fly  1374 KGAYALEVEARDGAPSARPNSNG-PNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTV 1437
            :.:|.:||:::|.:.||||...| |||.|.::||.::|.|||.|.|....||..|:|::|:.:.|
 Frog  1272 QSSYLIEVQSQDSSESARPEKQGQPNSDTAYVRIFVSDVNDNAPRFPMQRYETSVEEDKDVGYVV 1336

  Fly  1438 LTVTAKDHDE--SSRIRYEITSGNIGGAFAVKNMTGAIYVAGALDYETRRRYELRLAASDNLKEN 1500
            :||.|.|.||  ::::||:||:||..|.|.|....|||::..||:||...::||||.|||...||
 Frog  1337 ITVNASDEDEGANAKLRYQITNGNSKGIFDVDQEIGAIFITQALNYEQDTQFELRLVASDGKWEN 1401

  Fly  1501 YTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQN-IVYFLTGQGI 1564
            :|.|:|:|.::||..|:|.:..:...|.|. ..:||..||||:|||.|::..|: :.|.|.||| 
 Frog  1402 HTLVLINVINLNDEVPIFSQTEFHGSILEA-ITDLPVYVLQVSATDPDQEADQSALQYSLHGQG- 1464

  Fly  1565 DPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDIND 1629
                 |||:|.|::..|:|::.|.|||:|   |..|||.|.|.||.||||.|:|||.:::||:||
 Frog  1465 -----ANSEFIIDQFNGKIYIQKELDREQ---RATWRFLVLATDENGEGLTGFADVIIDVKDVND 1521

  Fly  1630 NAPIF---PQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFE 1691
            |.|.|   ..|.:.|.:.||..|...||.|||.|.|||..|.||.|.|.|.:|| :.|....:|.
 Frog  1522 NEPTFLCTTDGCFMGYIPENSPADTTVMEMTAFDLDDPKSGRNALLTYRIVQNV-QNEINLNLFA 1585

  Fly  1692 IEPDTGVIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVD 1756
            |.|.||.|.|.:..||||:...|.|.|.|.|||||.|||||:|.:.||||..|.||::.:...|.
 Frog  1586 IHPSTGSIYTVLGSLDREKNDKYLIVVEAKDGGGLSGTGTATILISDINDHAPVFTQNVYTAMVP 1650

  Fly  1757 ETDGTALPEMPILTVTVHDEDETNKFQYKVIDNSGYGAD---KFTMVRNN-DGTGSLKIVQPLDY 1817
            | :.|...|:.:|.....||.|.....:.:|     |.|   ||.:..:. ...|.:::.:.:||
 Frog  1651 E-NFTINSEVAVLYAWDLDEGENAMMTFSII-----GGDDDRKFFIETDKIHKRGIIRLRKKMDY 1709

  Fly  1818 EDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERANVE-VSVFEDTKVG 1881
            | ::....|...::|.|.      |.|.:||  .|:::.|.||:.|.|..|.:| :|:.||..:|
 Frog  1710 E-RIHERSFNLTVKVEDM------DFYSIAY--CVIQVEDSNDHAPVFYPAVLEAISLPEDVSIG 1765

  Fly  1882 TELEKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQVKILAIDDG 1946
            |.:....|.|.|.|...|.||.|..|||....|::..:|.|.:...||||.:..|.:.|||.|.|
 Frog  1766 TTVVHLSAIDLDSGQNGKFSYHILNSSDVGGLFSVATDGWVVVAGHLDRETLAEHNLVILATDLG 1830

  Fly  1947 SPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPPRKVVEILATDD-----DDRSKSNGPPF 2006
            .|..|.:.::.:|:.|:|||||:|...|.|::.|:.....::::..|..     |:.::.||.||
 Frog  1831 EPALTGSTSVLIIIGDVNDNAPEFEAQYSPMIWENTESPHILQVNKTSTLLHVRDNDTEVNGAPF 1895

  Fly  2007 QFRL--DPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVIKDHGSPAMTG 2069
            .|.|  ||         |.|.........:|.|:|:.|||||||..:.:.:||:|.|.|:|.::.
 Frog  1896 AFSLVHDP---------FNVHDFSLQDLHNGSAIITVLRSFDREVHQVFYLPILITDSGNPPLSS 1951

  Fly  2070 TSTLTVIIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDDWDLPDKKFYWEAMEHPRF 2134
            |:|||::|||:||:....|..|..||:|:|..|...:|:|...|||:|:  .|.:|.|..... |
 Frog  1952 TNTLTILIGDINDHPHSSGHLDCTVYSYKGILPTVTLGKVPAPDLDEWE--HKMYYLEGKSRV-F 2013

  Fly  2135 KLDEDSGMVTMRAGTREGRYHLRFKVYDRKHTQTDIPANVTVTVREIPHEAVVNSGSVRLSGISD 2199
            .|:|.:|::||:.|...|.|.||.||.|  .|..|:.:.|.:.|.:|..||.:|:.|||:||.:.
 Frog  2014 SLNEATGLLTMKEGAIPGVYKLRVKVSD--GTWPDVISTVRIVVHDITEEAALNAISVRISGFTA 2076

  Fly  2200 EDFI-----RVWNYRTQSMSRSKMDRFRDKLADLLNTERENVDIFSVQLKRKHPPLT---DVRFS 2256
            |||:     ::          ||.:..:..|.::|..|.:|:.||||   ...|.|:   |:.|:
 Frog  2077 EDFVLRPPDKI----------SKYELMKYLLLEILQAELDNIHIFSV---LNTPGLSGCMDIWFA 2128

  Fly  2257 AHGSPYYKPVRLNGIVLMHREEIEKDVGINITMVGIDECLYENQMC--EGSCTNSLEISPLPYMV 2319
            ..|...::..:|||||...||:||..:|:.:|.:|..||  ||..|  :..|.........|.|:
 Frog  2129 VSGDTRHQAEKLNGIVASSREKIESTLGVQVTQIGEYEC--ENVKCSHQTGCLVRSSYKQTPTMI 2191

  Fly  2320 NANKTALVGVRVDTIADCTCGARNFTKPESCRT---TPCHNGGRCVDTRFGPHCSCPVGYTGPRC 2381
            .|...:...|.:.|.|.|:|.:|.. :..||.:   .||.|||.|||...|..|.||:.:.||.|
 Frog  2192 TAGSVSFGSVTILTKALCSCPSREH-QHLSCSSYERNPCLNGGICVDGNMGYRCECPLSFHGPEC 2255

  Fly  2382 QQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKPDGLIIYNGPIVPPERDETLISDFIALELER 2446
            |||..:|.|.|:||:||:.:|.||.:||:|||.|.:||:::|||:.|.:..:|  .|||||||:.
 Frog  2256 QQTKHTFIGQGYAWFPPMALCYESQISLDFITEKGNGLLLFNGPMSPSKYRQT--EDFIALELQN 2318

  Fly  2447 GYPRLLIDFGSGTLELRVKTKKTLDDGEWHRIDLFWDTESIRMVVDFCKSAEIAEMEDGTPPEFD 2511
            |.|.|.|:.|||||.|:..||:.|.|..||.|.:..:.:.::|::|.|..|...|.:....|..|
 Frog  2319 GSPLLAINHGSGTLLLQFSTKQNLADRRWHNIRIESNGKKVKMILDHCSDALANEADGIRQPLHD 2383

  Fly  2512 DMSCQARGQIPPFNEYLNVNAPLQVGGLYREQFDQSLYFWHYMPTA------KGFDGCIRNLVHN 2570
            ..||:.....|....:|:|..|||:||:.           |.:|:.      .||.||:|||..:
 Frog  2384 RSSCEVSTGTPGNKRFLDVYQPLQLGGVK-----------HVLPSLHPALQFSGFIGCLRNLKVD 2437

  Fly  2571 SKLYDLAHPGLSRNSVAGCPQTEEVCAQTETTARCWEHGNCVGSLSEARCHCRPGWTGPACNIPT 2635
            ||:|||..|..|.||:.||..|:.:||.|.:.. |..||.|:..||..||||.||:.|..|....
 Frog  2438 SKVYDLEQPLESLNSIPGCTMTDGLCAVTGSPP-CGGHGFCISDLSSIRCHCHPGYHGDNCETVL 2501

  Fly  2636 IPTTFKAQSYVKYALSFEPDRFSTQVQLRFRTREEYGELFRVSDQHNREYGILEIKDGHLHFRYN 2700
            ....|:..|::.|.|...|...|..|||..|||.....:......:...:..||:.:|:...|:|
 Frog  2502 QEWNFEKDSWIHYQLHILPSLHSLSVQLMVRTRMASCTILSFVSTNKSSFLRLEVVEGNFAVRFN 2566

  Fly  2701 LNSLRTEEKDLWLNAIVVNDGQWHVVKVNRYGSAATLELDGGEGRRYNETFEFVGHQWLL-VDKQ 2764
            ...   .|..:.|.|:.::.|||..:...||.::.||.::.|.|.  :|....:|...|. ||..
 Frog  2567 FGE---REHLITLPALRIDHGQWTSLSFERYDNSFTLMINKGGGD--HELTSVMGTSRLFDVDSS 2626

  Fly  2765 E-----GVYAGGKAEYTGVRTFEVYADYQKSCLDDIRLEGKHLPLPPAMNGTQWGQATMARNLEK 2824
            .     .:..||:.::.|             ||.||||.|:||||....||  :......:.:.:
 Frog  2627 SILLGTSLLQGGRNDFQG-------------CLRDIRLNGRHLPLDGLENG--YSSTVSVQGVSR 2676

  Fly  2825 GCPSNKPCSNVICPDPFECVDLWNVYECTC--GEGRIMS--PDSKGCMDRNECLDMPCMNGATCI 2885
            ||.|: .|.:..|..|..|:|||..|||.|  .|..:::  ...|.|.. :.|:...|.||.||:
 Frog  2677 GCHSD-ACRSQPCQSPLNCIDLWRKYECRCPADEVEVINNMTGQKHCYP-SPCMRWSCRNGGTCV 2739

  Fly  2886 NLEPRLRYRCICPDGFWGENCELVQ--EGQTLKLSMGALAAILVCLLIILILVLVFVVYNRRREA 2948
             .:...:|.|.|.||:.|..||.:|  ..:.:.||.|::.||.:||||.:.|::.:.|:::...:
 Frog  2740 -AQSHQKYVCQCRDGYKGRICESIQINTAKMIGLSSGSILAISMCLLIFIALLVSYTVWSQWGSS 2803

  Fly  2949 HIKYPG-----PD----DDVRENIINYDDEGGGEDDM--------------------TAFDITPL 2984
            .....|     |:    :|:||::||:.:|.|.|.:.                    ..:|...|
 Frog  2804 KFHKGGVYHIPPEHESWEDIRESVINFSEESGIEHNQCWKKASKASGEVVHKSTKITNGYDKHKL 2868

  Fly  2985 QIPIGGPMPPELAPMKMPIMYPVMTLMPGQEPNVG----------------------MFIEEHKK 3027
            :.|:...: .:|...:..::.| ....|.:|.:.|                      .::.:...
 Frog  2869 KRPLRENV-QQLCSSENDLVLP-RPHQPAEESHTGKSTNATFHKLQISTENRHPSFQFYVPQMLW 2931

  Fly  3028 RADGDPNAPPFDDLRNYAYEGGGSTAGSLSSLASGTDDEQQEYDYLGAWGPRFDKLANMYGPEAP 3092
            .||.|..:.|.|.|.:|..||.||..||||||.|.:.||...||.|..||.:||:|..:|  .:|
 Frog  2932 AADNDMKSHPPDLLHSYTTEGQGSPTGSLSSLDSSSTDEDFNYDVLQEWGSKFDRLKELY--RSP 2994

  Fly  3093 NPHNT 3097
            :..:|
 Frog  2995 SDKDT 2999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
Cadherin_repeat 337..396 CDD:206637
E_set 449..541 CDD:298831 20/108 (19%)
Cadherin_repeat 549..>625 CDD:206637 28/78 (36%)
Cadherin_repeat 655..752 CDD:206637 30/96 (31%)
Cadherin_repeat 765..853 CDD:206637 39/87 (45%)
Cadherin_repeat 862..964 CDD:206637 41/102 (40%)
Cadherin_repeat 973..1074 CDD:206637 42/104 (40%)
Cadherin_repeat 1083..1166 CDD:206637 27/82 (33%)
Cadherin_repeat <1219..1298 CDD:206637 30/78 (38%)
Cadherin_repeat 1310..1414 CDD:206637 44/104 (42%)
Cadherin_repeat 1423..1514 CDD:206637 42/92 (46%)
Cadherin_repeat 1522..1630 CDD:206637 49/108 (45%)
Cadherin_repeat 1638..1741 CDD:206637 50/102 (49%)
Cadherin_repeat 1762..1861 CDD:206637 24/102 (24%)
Cadherin_repeat 1871..1966 CDD:206637 35/95 (37%)
Cadherin_repeat 1974..2083 CDD:206637 39/115 (34%)
EGF 2350..2380 CDD:278437 14/32 (44%)
LamG 2385..2570 CDD:238058 73/190 (38%)
EGF_2 <2605..2631 CDD:285248 13/25 (52%)
Laminin_G_2 2665..2800 CDD:280389 34/140 (24%)
EGF_CA 2869..2907 CDD:238011 12/37 (32%)
Cadherin_C 2952..3088 CDD:279398 46/186 (25%)
LOC100494953XP_031759339.1 PHA03247 <51..374 CDD:223021 3/8 (38%)
Cadherin_repeat 475..564 CDD:206637 33/97 (34%)
Cadherin_repeat 575..667 CDD:206637 29/95 (31%)
Cadherin_repeat 681..769 CDD:206637 39/87 (45%)
Cadherin_repeat 778..877 CDD:206637 41/102 (40%)
Cadherin_repeat 890..986 CDD:206637 41/100 (41%)
Cadherin_repeat 995..1083 CDD:206637 32/98 (33%)
Cadherin_repeat 1095..1198 CDD:206637 40/106 (38%)
Cadherin_repeat 1207..1313 CDD:206637 45/107 (42%)
Cadherin_repeat 1322..1414 CDD:206637 41/91 (45%)
Cadherin_repeat 1423..1522 CDD:206637 49/108 (45%)
Cadherin_repeat 1537..1636 CDD:206637 50/99 (51%)
Cadherin_repeat 1644..1744 CDD:206637 27/114 (24%)
Cadherin_repeat 1756..1850 CDD:206637 34/93 (37%)
Cadherin_repeat 1857..1965 CDD:206637 39/116 (34%)
EGF_CA 2221..2256 CDD:238011 15/34 (44%)
LamG 2261..2437 CDD:238058 73/188 (39%)
EGF_CA <2470..2498 CDD:238011 13/28 (46%)
LamG 2526..2654 CDD:214598 37/145 (26%)
EGF_CA <2732..2760 CDD:238011 11/28 (39%)
Cadherin_C 2809..2994 CDD:395833 47/188 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 167 1.000 Domainoid score I3800
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1461 1.000 Inparanoid score I114
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4879at33208
OrthoFinder 1 1.000 - - FOG0001479
OrthoInspector 1 1.000 - - mtm9463
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2878
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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