DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and SYTL3

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001229313.1 Gene:SYTL3 / 94120 HGNCID:15587 Length:610 Species:Homo sapiens


Alignment Length:469 Identity:95/469 - (20%)
Similarity:171/469 - (36%) Gaps:120/469 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SANEKDEDQQREALVAG---AVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSED-------NDPA 117
            |.::.|...::..|..|   .||..        ..:..|..|.|::...:.:.|       .||.
Human   201 SKSQNDMTSEKHLLATGPRQCVGQT--------ERRSQSDTAVNVTTRKVSAPDILKPLNQEDPK 257

  Fly   118 FWVPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSDK-----HVVLAM 177
                   .||..|.:| .|.....||.|..:|..:..:|....:|...:...|.     .:..|:
Human   258 -------CSTNPILKQ-QNLPSSPAPSTIFSGGFRHGSLISIDSTCTEMGNFDNANVTGEIEFAI 314

  Fly   178 HPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEA 242
            |                    ..:::||                             |.:.:...
Human   315 H--------------------YCFKTHS-----------------------------LEICIKAC 330

  Fly   243 QNL-QPRQFSGTADPYAKVRLLPDKKNFW--QTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEIL 304
            :|| ...:.....:||.|..||||:.:..  :|.:.:.|::|.|.|...::|....:..|.:::.
Human   331 KNLAYGEEKKKKCNPYVKTYLLPDRSSQGKRKTGVQRNTVDPTFQETLKYQVAPAQLVTRQLQVS 395

  Fly   305 LYDFDAYSRHVCIGGSKLHLANLDLSE---QLKLWTPLSSASAQDMKVDL----GDIMV-SLAYL 361
            ::.....:|.|.:|...:.||..|..:   |...|.|| .|.|:..:..:    |::.| :...|
Human   396 VWHLGTLARRVFLGEVIIPLATWDFEDSTTQSFRWHPL-RAKAEKYEDSVPQSNGELTVRAKLVL 459

  Fly   362 PSAER-----------------LMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTG 409
            ||..|                 |.:|::.|:||.:..|...:|  :||..|..|..:|: :.|:.
Human   460 PSRPRKLQEAQEGTDQPSLHGQLCLVVLGAKNLPVRPDGTLNS--FVKGCLTLPDQQKL-RLKSP 521

  Fly   410 VQRGTLNPVYNEALAFD-VAKETLKNCVLEFTVVHDGLLGSSE-ILGRTLIGNSPEVR------T 466
            |.|....|.:..:..|. |....|:...||.||....|.|.:: :||.|.:|:..:..      :
Human   522 VLRKQACPQWKHSFVFSGVTPAQLRQSSLELTVWDQALFGMNDRLLGGTRLGSKGDTAVGGDACS 586

  Fly   467 EEKIFFEEVFRAKN 480
            ..|:.:::|..:.|
Human   587 LSKLQWQKVLSSPN 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 27/128 (21%)
C2B_Synaptotagmin 352..488 CDD:175975 38/155 (25%)
SYTL3NP_001229313.1 PHD_SF 8..123 CDD:328929
FYVE_Slp3 60..108 CDD:277304
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..239 5/27 (19%)
C2A_SLP-3 307..434 CDD:176038 31/176 (18%)
C2B_SLP_1-2-3-4 448..610 CDD:175987 38/156 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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