DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and DOC2A

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_024306240.1 Gene:DOC2A / 8448 HGNCID:2985 Length:467 Species:Homo sapiens


Alignment Length:479 Identity:122/479 - (25%)
Similarity:183/479 - (38%) Gaps:119/479 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTL 156
            |||....|..|        .....||..||.::...||:   :..||.|......          
Human    37 PRGPGPEGGGG--------GGGEAPAHLVPLALAPPAAL---LGATTPEDGAEVD---------- 80

  Fly   157 SYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRS----------HSQPKTIN 211
            ||.|..:..:                  .::...|.:.:...||:.|          |..|   .
Human    81 SYDSDDATAL------------------GTLEFDLLYDRASCTLHCSILRAKVGTPCHPSP---G 124

  Fly   212 PVSLNEVRGNLHVS---------LGYDPVGGLLNVRLLE-----------------AQNLQPRQF 250
            ||.:....| .|.|         |...|..|||....|:                 .|.|:|..|
Human   125 PVCVQPPEG-AHSSFPSQACSFVLPLPPPSGLLQGPALQEGWREVPGASSPLPCPPLQGLKPMDF 188

  Fly   251 SGTADPYAKVRLLPD--KKNFWQTRIHKRTLNPVFDEQFVFE-VTAGVIDKRTVEILLYDFDAYS 312
            :|.||||.|:.|||.  |.|..:|:..:.|||||::|...:. :|...|..:.:.|.:.|.|..|
Human   189 NGLADPYVKLHLLPGACKANKLKTKTQRNTLNPVWNEDLTYSGITDDDITHKVLRIAVCDEDKLS 253

  Fly   313 RHVCIG-----------GSKLHLANLDLSEQLKLWTPLSSASA-----------------QDMKV 349
            .:..||           ..|.|. |:.|..|:.|.:|.|.::|                 |.:..
Human   254 HNEFIGEIRVPLRRLKPSQKKHF-NICLERQVPLASPSSMSAALRGISCYLKELEQAEQGQGLLE 317

  Fly   350 DLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGT 414
            :.|.|::||:|......|:|.:::..:|..: |....|||||| |.|.|...|..|.||.|::.|
Human   318 ERGRILLSLSYSSRRRGLLVGILRCAHLAAM-DVNGYSDPYVK-TYLRPDVDKKSKHKTCVKKKT 380

  Fly   415 LNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVFRAK 479
            |||.:||...:::...||....||.||....:..|::.:|...:|  |..|.|.:..:.:..:..
Human   381 LNPEFNEEFFYEIELSTLATKTLEVTVWDYDIGKSNDFIGGVSLG--PGARGEARKHWSDCLQQP 443

  Fly   480 NATAQ-WVPLQE---PANNLATSA 499
            :|..: |..|..   ||....:||
Human   444 DAALERWHTLTSELPPAAGALSSA 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 46/162 (28%)
C2B_Synaptotagmin 352..488 CDD:175975 43/136 (32%)
DOC2AXP_024306240.1 C2A_Rabphilin_Doc2 90..280 CDD:176000 50/212 (24%)
C2B_Rabphilin_Doc2 321..453 CDD:176030 42/135 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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