DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and SYT3

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001153800.1 Gene:SYT3 / 84258 HGNCID:11511 Length:590 Species:Homo sapiens


Alignment Length:559 Identity:161/559 - (28%)
Similarity:252/559 - (45%) Gaps:97/559 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EEDISLAQIGVYASVSFLVVSAVGAALYTTCSKRYRLNWFEQNLLESANEKDEDQQREAL----- 76
            :.|||::.:.|.  |:|..:..:|.:|:.:    ::|.|...          .|:...|:     
Human    48 DADISVSLLSVI--VTFCGIVLLGVSLFVS----WKLCWVPW----------RDKGGSAVGGGPL 96

  Fly    77 ---------VAGAVGYNVDNV------NEVPRGKYSSGNAGN-------LSPTSLKSEDN-DPAF 118
                     :||.||....::      :.:..|.:...:|.:       |.|.||...|. :|::
Human    97 RKDLGPGVGLAGLVGGGGHHLAAGLGGHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPSY 161

  Fly   119 W----VPASVTSTAAIQQQVSNTTEE------------SAPPTS---PTGSLKSNTLSYCSTTSV 164
            .    .|.:..:..|...:.|.|:.|            ..||:.   |:........|...||..
Human   162 LDMDSYPEAAAAAVAAGVKPSQTSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRY 226

  Fly   165 P-IARSDKHVVLAMHP-----SRPRVSSM-------NAKLDHTKIDMTLY--------RSHSQPK 208
            | :.|......|...|     .||....:       .||| ..:|...||        ||...|.
Human   227 PALPRPLTQQTLTSQPDPSSEERPPALPLPLPGGEEKAKL-IGQIKPELYQGTGPGGRRSGGGPG 290

  Fly   209 TINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTR 273
            : .........|.:..:|.|......|.||:|:|.:|..:..:|.:|||.|:.||||:|..:||:
Human   291 S-GEAGTGAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTK 354

  Fly   274 IHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLAN-LDLSEQ---LK 334
            :|::||||||:|.|.|.|....:.:|.:...:||||.:|||..||  ::.|.| |:|:||   ..
Human   355 VHRKTLNPVFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIG--QVVLDNLLELAEQPPDRP 417

  Fly   335 LWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPG 399
            ||..:....::  |.|||::..||.|||:|.||.|.:|||.||:.: |....||||||.:|:.. 
Human   418 LWRDIVEGGSE--KADLGELNFSLCYLPTAGRLTVTIIKASNLKAM-DLTGFSDPYVKASLISE- 478

  Fly   400 GKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEV 464
            |:::|||||.:::.||||.|||||.||||.|:::|..|...||....:|.:|::|...:|.....
Human   479 GRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPDAAD 543

  Fly   465 RTEEKIFFEEVFRAKNATAQWVPLQEPANNLATSAKSSK 503
            ....:.:.|.:...:.....|..|.| ...:.:..|.||
Human   544 PHGREHWAEMLANPRKPVEHWHQLVE-EKTVTSFTKGSK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 50/126 (40%)
C2B_Synaptotagmin 352..488 CDD:175975 53/135 (39%)
SYT3NP_001153800.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..220 14/76 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..260 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..295 5/22 (23%)
C2A_Synaptotagmin-1-5-6-9-10 299..424 CDD:176031 50/126 (40%)
C2B_Synaptotagmin-3-5-6-9-10 433..567 CDD:176048 53/135 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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