DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Sytl3

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_113572.1 Gene:Sytl3 / 83672 MGIID:1933367 Length:607 Species:Mus musculus


Alignment Length:382 Identity:84/382 - (21%)
Similarity:154/382 - (40%) Gaps:88/382 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 EESAPPTSPT------GSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKID 197
            ::..||:|||      |.|:..:|...::|...:...|                 ||        
Mouse   264 KQDTPPSSPTHSAVFSGGLRHGSLISINSTCTEMGNFD-----------------NA-------- 303

  Fly   198 MTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNL-QPRQFSGTADPYAKVR 261
                               .|.|.:..::.|......|.:.:...:|| ...:.....:||.|..
Mouse   304 -------------------NVTGEIEFAIHYCVKSCSLEICIKTCKNLAYGEEKKRKCNPYVKTY 349

  Fly   262 LLPDKKNFW--QTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHL 324
            ||||:.:..  :||:.|.||:|.|:|...::|..|.:..|.:::.::.....:|.|.:|...|.|
Mouse   350 LLPDRSSQGKRKTRVQKNTLDPTFEETLKYQVDPGQLMTRRLQVSVWHLGTLARRVFLGEVILPL 414

  Fly   325 ANLDLSE---QLKLWTPLSSASAQDMKVDL----GDIMV-SLAYLPSAER--------------- 366
            |..|..:   |...|.|| .|.|:..:.::    |::.| :...||:..|               
Mouse   415 AMWDFKDSTAQNARWYPL-RAKAEKYEENIPQNNGELAVRAKLVLPAGPRKPQEAQEGQLALNGQ 478

  Fly   367 LMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFD-VAKE 430
            |.:|::.|:||.:..|...:|  :||..|..|..:|::. |:.|.:....|.:..:..|: |:..
Mouse   479 LCLVVLGAKNLPVRSDGTLNS--FVKGCLTLPNQQKLRV-KSPVLKKQACPQWKHSFVFNGVSSS 540

  Fly   431 TLKNCVLEFTVVHDGLLGSSE-ILGRTLIGNS------PEVRTEEKIFFEEVFRAKN 480
            .|:...||.||....:.|.:: :||...:|:.      |:..::.|:.:..|..:.|
Mouse   541 QLRQSTLELTVWDQAIFGMNDRLLGEARLGSKGGAAGCPDSGSQSKLQWHRVLSSPN 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 35/128 (27%)
C2B_Synaptotagmin 352..488 CDD:175975 35/153 (23%)
Sytl3NP_113572.1 PHD_SF 14..123 CDD:389947
FYVE_like_SF 60..108 CDD:333710
DUF4195 <200..>292 CDD:372746 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..279 5/14 (36%)
C2 306..433 CDD:387358 34/127 (27%)
C2B_SLP_1-2-3-4 447..607 CDD:175987 35/154 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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