DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Sytl2

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001355807.1 Gene:Sytl2 / 83671 MGIID:1933366 Length:2153 Species:Mus musculus


Alignment Length:541 Identity:124/541 - (22%)
Similarity:204/541 - (37%) Gaps:143/541 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 REALVAGAVGYNVDNVNEVPRG----KYSSGNAG----NLSPTSLKSEDNDP---------AFWV 120
            ||..:..|..|......:.|..    ::|.||..    |...||...|::.|         |..:
Mouse  1646 REVKLVLATPYKRQEEEQGPEACSEYEFSDGNTSSNRENWRNTSSSEEEHSPVLKTLERRAARKL 1710

  Fly   121 PA----SVTSTAAIQQQVSN-------------------TTEESAPPTSPTGSLKSNTLSYCS-- 160
            |:    .:.|.::.|.:|.|                   .|.|..|..|...||..|..|:..  
Mouse  1711 PSKSLEDIPSDSSNQAKVDNLPEELVRSAEDDQKADQEPDTNECIPGISTVPSLPDNQFSHPDKL 1775

  Fly   161 ---TTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLN------ 216
               :.|||....|:        |..|.:...::..:     .|.|....|.::..:|.:      
Mouse  1776 KRMSKSVPAFLQDE--------SDDRETDTASESSY-----QLRRYKKSPSSLTNLSSSSGMTSL 1827

  Fly   217 ------------------EVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQF-SGTADPYAKVRL 262
                              ||:|::..:|.|......|:|.:.:.::|..... ...:|||.|..|
Mouse  1828 SSASGSVMSVYSGDFGNLEVKGSVQFALDYVESLKELHVFVAQCKDLAAADVKKQRSDPYVKTYL 1892

  Fly   263 LPDKKNFW--QTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLA 325
            ||||....  :|.:.|:|||||::|...:::....:..:.:.:.::..|.:.|:..:|..:|.|.
Mouse  1893 LPDKGKMGKKKTLVVKKTLNPVYNEILRYKIERQFLKTQKLNLSVWHRDTFKRNSFLGEVELDLE 1957

  Fly   326 NLD----LSEQLKLWTPLSSASAQDMKVDL-----GDIMVSLAYLPS-----------------A 364
            ..|    .::||| |.||...:|   .|.|     |::.::|.|:|.                 .
Mouse  1958 TWDWDSKQNKQLK-WYPLKRKTA---PVALETENRGEMKLALQYVPEPSPGKKLPTTGEVHIWVK 2018

  Fly   365 ERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFD-VA 428
            |.|.:.|::..:|       ||   :||.|:| |...:..::||.....|.|||:|..:.:| ..
Mouse  2019 ECLDLPLLRGSHL-------NS---FVKCTIL-PDTSRKSRQKTRAVGKTTNPVFNHTMVYDGFR 2072

  Fly   429 KETLKNCVLEFTVVHDGLLGSSEILGRTLIG------NSPEV-----RTEEKIFFEEVFRAKNAT 482
            .|.|....:|.| |.|....:::.||...||      ...||     .:||...:|::..:.|. 
Mouse  2073 PEDLMEACVELT-VWDHYKLTNQFLGGLRIGFGTGKSYGTEVDWMDSTSEEVALWEKMVNSPNT- 2135

  Fly   483 AQWVPLQEPANNLATSAKSSK 503
              ||....|...|.. ||.||
Mouse  2136 --WVEATLPLRMLLI-AKLSK 2153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 36/129 (28%)
C2B_Synaptotagmin 352..488 CDD:175975 41/164 (25%)
Sytl2NP_001355807.1 PHD_SF 5..>41 CDD:419867
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..98
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..289
C2A_SLP-1_2 1848..1975 CDD:176039 34/127 (27%)
C2B_SLP_1-2-3-4 1988..2144 CDD:175987 42/170 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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