DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and AT5G17980

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_197299.1 Gene:AT5G17980 / 831665 AraportID:AT5G17980 Length:1049 Species:Arabidopsis thaliana


Alignment Length:119 Identity:36/119 - (30%)
Similarity:58/119 - (48%) Gaps:14/119 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 LPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAF 425
            :.:..:|:|.::.|::| ...|...:|.|||.:...|      ::|:|......||||:||.|.|
plant     1 MATTRKLVVEVVDAKDL-TPKDGHGTSSPYVVLDYYG------QRRRTRTIVRDLNPVWNETLEF 58

  Fly   426 DVAK---ETLKNCVLEFTVVHDGLLGS---SEILGRTLIGNSPEV-RTEEKIFF 472
            .:||   ..|...|||..:.||...|.   :..|||..:|:...| :.||.:.:
plant    59 SLAKRPSHQLFTDVLELDMYHDKNFGQTRRNNFLGRIRLGSDQFVGQGEEALIY 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033
C2B_Synaptotagmin 352..488 CDD:175975 36/119 (30%)
AT5G17980NP_197299.1 C2A_MCTP_PRT_plant 6..136 CDD:175989 36/114 (32%)
C2B_MCTP_PRT_plant 324..446 CDD:176024
C2C_MCTP_PRT_plant 478..623 CDD:175986
C2D_MCTP_PRT_plant 635..764 CDD:176025
PRT_C 893..1049 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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