DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and AT4G11610

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_192898.2 Gene:AT4G11610 / 826766 AraportID:AT4G11610 Length:1011 Species:Arabidopsis thaliana


Alignment Length:503 Identity:116/503 - (23%)
Similarity:190/503 - (37%) Gaps:160/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASV-----TSTAAIQQQVSN 136
            |.|.:|..|...:|   ....|..|.|..|.:|     |||  :|.::     :....:...:.|
plant   121 VRGELGLKVYITDE---ASLKSSAASNDHPDNL-----DPA--LPRAMNVEHRSDKRHVFYNLPN 175

  Fly   137 TTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSD-----------KHVV--LAMHPSRPRVSSMN 188
            :.:|. ....|.|..:|::|:         |..|           ||.|  :...|:||      
plant   176 SAQEH-QHQHPQGPNQSSSLA---------AEQDNHNEHHHHYVPKHQVDEMRSEPARP------ 224

  Fly   189 AKLDHTKIDMTLYRSHS----QPKTINPVSLNEVRGNLHVSLGYDPVGG---------------- 233
            :||.|         :||    ||...   :|.|...:|.   |...|||                
plant   225 SKLVH---------AHSIASAQPADF---ALKETSPHLG---GGRVVGGRVIHKDKTATSTYDLV 274

  Fly   234 ----LLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVF---EV 291
                .|.||:::|:.|.....:|:.||:.:|| :.:.|..  ||..::..:|.:::.|.|   .:
plant   275 ERMYFLYVRVVKARELPIMDITGSVDPFVEVR-VGNYKGI--TRHFEKRQHPEWNQVFAFAKERM 336

  Fly   292 TAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDL-----SEQLKLWTPLSSASAQDMKVDL 351
            .|.|:     |:::.|.|.. :...:|..:..:.::.|     |.....|..|.....:.:|   
plant   337 QASVL-----EVVVKDKDLL-KDDYVGFVRFDINDVPLRVPPDSPLAPQWYRLEDKKGEKIK--- 392

  Fly   352 GDIMVSL-----------------AYLP----------------SAERLMVV---LIKARNLRIV 380
            |::|:::                 |.:|                .|.||..|   :|:|::| |.
plant   393 GELMLAVWIGTQADEAFSDAWHSDAAMPVDCSPAISAVLRSKVYHAPRLWYVRVNVIEAQDL-IP 456

  Fly   381 DDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDG 445
            .|.....|.|||..|    |.::.|.:. .|..||..|:||...|.||:....:.||   .|.|.
plant   457 TDKTRFPDVYVKAQL----GNQVMKTRP-CQARTLGAVWNEDFLFVVAEPFEDHLVL---TVEDR 513

  Fly   446 LL-GSSEILGRTLIG-NSPEVRTEEKIFFEEVFRAKNATAQWVPLQEP 491
            :. |..||:|||.|. |:.|.|.::.:..          |:|..|:.|
plant   514 VAPGKDEIVGRTYIPLNTVEKRADDHMIH----------ARWYNLERP 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 31/150 (21%)
C2B_Synaptotagmin 352..488 CDD:175975 45/173 (26%)
AT4G11610NP_192898.2 C2A_MCTP_PRT_plant 7..133 CDD:175989 4/11 (36%)
C2B_MCTP_PRT_plant 279..403 CDD:176024 29/135 (21%)
C2C_MCTP_PRT_plant 443..593 CDD:175986 40/128 (31%)
C2D_MCTP_PRT_plant 605..728 CDD:176025
PRT_C 856..1011 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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