DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and AT3G03680

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_187018.1 Gene:AT3G03680 / 821190 AraportID:AT3G03680 Length:1017 Species:Arabidopsis thaliana


Alignment Length:527 Identity:105/527 - (19%)
Similarity:168/527 - (31%) Gaps:184/527 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VYASVSFLVVSAVGAALYTTCSKRYRLNW-----FEQNLLES--------ANEKDEDQQREALVA 78
            |||.   ||:...|....:...|    :|     ||:..|.|        :.||.|.:.:.....
plant   301 VYAK---LVIGTNGVKTRSQTGK----DWDQVFAFEKESLNSTSLEVSVWSEEKIEKEDKTTTTT 358

  Fly    79 ----GAVGYNVDNV-NEVP------------RGKYSSGN-----------------------AGN 103
                |.|.:::..| ..||            ..:.|.||                       :|.
plant   359 ESCLGTVSFDLQEVPKRVPPDSPLAPQWYTLESEKSPGNDVMLAVWLGTQADEAFQEAWQSDSGG 423

  Fly   104 LSPTSLKSEDNDPAFW-VPASVTSTAAIQQQVSNTTEESAPPTS--PTGSLKSNTLSYCSTTSVP 165
            |.|.:.......|..| :..:|..|..:|..:.:..:...|.|.  ....|.........|:..|
plant   424 LIPETRSKVYLSPKLWYLRLTVIQTQDLQLGLGSEAKSKIPTTELYVKAQLGPQVFKTARTSIGP 488

  Fly   166 IARS---------DKHVVLAMHPSRPRV------SSMNAKLDHTKIDMTLYRSHSQPKTINPVS- 214
            .|.|         :..|.:|..|..|.:      .:....:..|||.|......:..:| .|.| 
plant   489 SASSSGSGNPTWNEDLVFVASEPFEPFLIVTVEDITNGQSIGQTKIHMGSVERRNDDRT-EPKSR 552

  Fly   215 --------LNEVRGNLHVSL----GY---------------------DPVGGLLNVRLLEAQNLQ 246
                    .....|.:||.:    ||                     .|..|||.|.:..|.||.
plant   553 WFNLAGDEKKPYSGRIHVKVCLEGGYHVLDEAAHVTSDVRPSAKQLAKPPIGLLEVGIRGATNLL 617

  Fly   247 PRQ----FSGTADPYAKVRLLPDKKNFWQTRIHKRTL----NPVFDEQFVFEV-------TAGVI 296
            |.:    ..||.|.|...:..|.    |   |..||:    ||.::||:.::|       |.||.
plant   618 PVKTRDGTRGTTDAYVVAKYGPK----W---IRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGVF 675

  Fly   297 D----KRTVEILLYDFDAYSRHVCIGGSKLHLANLDLS----EQLKLWTPLSSASAQDMKVDLGD 353
            |    ||.      :.....|.|.:|..::.|:.||::    ....|...|.|.:.:     :|:
plant   676 DNGRYKRD------ESGKQGRDVRVGKIRVRLSTLDMNRIYLNSYTLTVILPSGAKK-----MGE 729

  Fly   354 IMVSL------------AYL-PSAERLMVV---------LIKARNLRIVDDARNSSDPYVKVTLL 396
            :.:::            ||: |...|:..|         :::...:|||......|:|       
plant   730 VEIAVRFSCPSWLSIIQAYVTPMLPRMHYVRPLGPAQQDILRHTAMRIVTARLARSEP------- 787

  Fly   397 GPGGKKI 403
             |.|:::
plant   788 -PLGQEV 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 42/170 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 13/74 (18%)
AT3G03680NP_187018.1 C2 8..134 CDD:472691
C2B_MCTP_PRT_plant 282..407 CDD:176024 23/112 (21%)
C2C_MCTP_PRT_plant 440..593 CDD:175986 26/153 (17%)
C2D_MCTP_PRT_plant 605..733 CDD:176025 37/145 (26%)
PRT_C 861..1017 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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