DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt13

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_110466.2 Gene:Syt13 / 80977 RGDID:621877 Length:426 Species:Rattus norvegicus


Alignment Length:480 Identity:125/480 - (26%)
Similarity:191/480 - (39%) Gaps:95/480 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VSAVGAALYT----------TCSKRYRLNWFEQNLLESANEKDEDQQREALVAGAVGYNVDNVNE 90
            |.|:||.|.|          ||..|:...  ::.||....|.|.::.|..::..|..:||....|
  Rat     7 VIALGATLGTATSILALCGVTCLCRHMHP--KKGLLPRDREPDPEKARPGVLQAAQQFNVKKSTE 69

  Fly    91 VPRGKYSSGNAGNLSPTSLKSEDNDPAFWVP-ASVTSTAAIQ--QQVSNTTEESAPPTSPTGSLK 152
                           |...:.....|..:.| .:||:...|.  .....||||||.|.||.    
  Rat    70 ---------------PVQPRPLLKFPDIYGPRPAVTAPEVINYADYTLGTTEESAAPASPQ---- 115

  Fly   153 SNTLSYCSTTSVPIARSDKHV------VLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTIN 211
                          |:||..:      .|.:.|....|..:...                 :|.|
  Rat   116 --------------AQSDSRLKRQVTEELFILPQNGVVEDVCVM-----------------ETWN 149

  Fly   212 P---VSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNF-WQT 272
            |   .|.|:. ..||..|.||.....|.|..|||..   ....|..|.|.:..:.....:. .||
  Rat   150 PEKAASWNQA-PKLHFRLDYDQKKAELFVTSLEAVT---SDHEGGCDCYIQGSVAVKTGSVEAQT 210

  Fly   273 RIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWT 337
            .:.||.|:..::|.....:....:...|:.:.|...|.:|||..||..:|.|....:......|.
  Rat   211 ALKKRQLHTTWEEGLTLPLGEEELPTATLTLTLRTCDRFSRHSVIGELRLGLNGASVPLGTAQWG 275

  Fly   338 PLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSS------DPYVKVTLL 396
            .|.: :|::.....|::::|::|||:|.||:||||||:||.     .|.|      |..|||||.
  Rat   276 ELKT-TAKEPSAGTGEVLLSISYLPAANRLLVVLIKAKNLH-----SNQSKELLGKDVSVKVTLK 334

  Fly   397 GPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNS 461
            .. .:|:||::|...:..:|||:||.:.|::..:.|:...:|..|:..|..|.|..|||..:|  
  Rat   335 HQ-AQKLKKKQTKRAKHKINPVWNEMIMFELPDDLLQASSVELEVLGQGEEGPSCELGRCSLG-- 396

  Fly   462 PEVRTEEKIFFEEVFR-AKNATAQW 485
            ......|:..:||:.: .:...|.|
  Rat   397 LHASGSERSHWEEMLKNPRRQIAMW 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 31/123 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 49/141 (35%)
Syt13NP_110466.2 C2 160..277 CDD:301316 30/119 (25%)
C2B_Synaptotagmin-13 288..425 CDD:176052 49/142 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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