DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt13

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_109650.1 Gene:Syt13 / 80976 MGIID:1933945 Length:426 Species:Mus musculus


Alignment Length:480 Identity:123/480 - (25%)
Similarity:191/480 - (39%) Gaps:95/480 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VSAVGAALYT----------TCSKRYRLNWFEQNLLESANEKDEDQQREALVAGAVGYNVDNVNE 90
            |.|:||.|.|          ||..|:...  ::.||....|.|.::.|..::..|..:|:....|
Mouse     7 VIALGATLGTATSILALCGVTCLCRHMHP--KKGLLPRDREPDPEKARPGVLQAAQQFNIKKSTE 69

  Fly    91 VPRGKYSSGNAGNLSPTSLKSEDNDPAFWVP-ASVTSTAAIQ--QQVSNTTEESAPPTSPTGSLK 152
                           |...:.....|..:.| .:||:...|.  .....||||||.|.||.    
Mouse    70 ---------------PVQPRPLLKFPDIYGPRPAVTAPEVINYADYTLETTEESAAPASPQ---- 115

  Fly   153 SNTLSYCSTTSVPIARSDKHV------VLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTIN 211
                          |:||..:      .|::.|....|..:...                 :|.|
Mouse   116 --------------AQSDSRLKRQVTEELSIRPQNGVVEDVCVM-----------------ETWN 149

  Fly   212 P---VSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNF-WQT 272
            |   .|.|:. ..||..|.||.....|.|..|||..   ....|..|.|.:..:.....:. .||
Mouse   150 PEKAASWNQA-PKLHFRLDYDQKKAELFVTSLEAVT---SDHEGGCDCYIQGSVAVKTGSVEAQT 210

  Fly   273 RIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWT 337
            .:.||.|:..::|.....:....:...|:.:.|...|.:|||..||..:|.|....:......|.
Mouse   211 ALKKRQLHTTWEEGLALPLGEEELPTATLTLTLRTCDRFSRHSVIGELRLGLDGASVPLGAAQWG 275

  Fly   338 PLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSS------DPYVKVTLL 396
            .|.: :|::.....|::::|::|||:|.||:||||||:||.     .|.|      |..|||||.
Mouse   276 ELKT-TAKEPSAGAGEVLLSISYLPAANRLLVVLIKAKNLH-----SNQSKELLGKDVSVKVTLK 334

  Fly   397 GPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNS 461
            .. .:|:||::|...:..:|||:||.:.|::..:.|:...:|..|:..|..|.|..||...:|  
Mouse   335 HQ-AQKLKKKQTKRAKHKINPVWNEMIMFELPDDLLRASSVELEVLGQGEEGPSCELGHCSLG-- 396

  Fly   462 PEVRTEEKIFFEEVFR-AKNATAQW 485
            ......|:..:||:.: .:...|.|
Mouse   397 LHASGSERSHWEEMLKNPRRQIAMW 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 31/123 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 48/141 (34%)
Syt13NP_109650.1 C2 160..277 CDD:301316 30/119 (25%)
C2B_Synaptotagmin-13 288..425 CDD:176052 48/142 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.