DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and syt9a

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_001336058.4 Gene:syt9a / 798433 ZFINID:ZDB-GENE-031002-18 Length:547 Species:Danio rerio


Alignment Length:520 Identity:164/520 - (31%)
Similarity:246/520 - (47%) Gaps:88/520 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EEDISLAQIGVYASVSFLVVSAVGAALY-TTCSKRYRLNWF---EQNLLESANEKDEDQQR---E 74
            :.|||:       |:..|||:|.|.||: .:....::|.|.   |:.|.....|...|...   .
Zfish    48 DSDISI-------SLLSLVVTACGLALFGVSLFVSWKLCWIPWRERGLSPGTKEGHPDPPHPPPP 105

  Fly    75 ALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTE 139
            .|....:...||...:    :.|:..:..:..|::......||  ||.|                
Zfish   106 PLQPQPIYTEVDATLD----RRSNARSSVVKETTVPPTPVSPA--VPGS---------------- 148

  Fly   140 ESAPPTSPT--GSLKSNTLSYCSTTSVPIARSDKHVVLAMH-----------PSRP--RVSSMNA 189
               ||..|.  .:||   :|:.| ..:|:....|.....:|           ||..  |.||:..
Zfish   149 ---PPAVPVPEAALK---ISHTS-PDIPLEVESKTQENGVHGNTRMQRQITDPSSTCVRQSSIRR 206

  Fly   190 KLDHTKIDMTLYRSHSQPKTINPVSLNEVR----------------------GNLHVSLGYDPVG 232
            :::.:..|.|:.:...| .::..:||.:::                      |.||..|.||...
Zfish   207 QMNQSNPDFTVTQFQRQ-DSLTGMSLGQLKPELYKQRSLDGEDSRSSRVGSCGRLHFILKYDCDL 270

  Fly   233 GLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVID 297
            ..|.|::..||:|..:.||||:|||.|:.||||:|...||::|::||||||||.|:|.|....:.
Zfish   271 EQLIVKIHRAQDLPAKDFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVAYADLP 335

  Fly   298 KRTVEILLYDFDAYSRHVCIGGSKL--HLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAY 360
            .|.:...:||||.:|||..||...:  .|..:|...:.||...:...|:.:  |||||:|.||.|
Zfish   336 TRKLHFSVYDFDRFSRHDIIGQVVVDNFLDLVDFPRETKLCRDIQYVSSDN--VDLGDLMFSLCY 398

  Fly   361 LPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAF 425
            ||:|.||.:.:||||||:.: |...:|||||||:|: ..|:::|||||..:|.|||||||||:.|
Zfish   399 LPTAGRLTITMIKARNLKAM-DITGASDPYVKVSLM-CDGRRLKKRKTSTKRNTLNPVYNEAIVF 461

  Fly   426 DVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQE 490
            ||..|.:....|...|:....:|.:|::|...:||..|....|. :.|.:...:...|.|.||.|
Zfish   462 DVPPENIDQISLLVAVMDYDRVGHNEVIGVCRVGNDAEGLGREH-WNEMLTYPRKPIAHWHPLVE 525

  Fly   491  490
            Zfish   526  525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 52/146 (36%)
C2B_Synaptotagmin 352..488 CDD:175975 58/135 (43%)
syt9aXP_001336058.4 C2 257..381 CDD:301316 52/123 (42%)
C2B_Synaptotagmin-3-5-6-9-10 390..523 CDD:176048 58/135 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.780

Return to query results.
Submit another query.