DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt11b

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001156003.1 Gene:syt11b / 794707 ZFINID:ZDB-GENE-090601-7 Length:456 Species:Danio rerio


Alignment Length:539 Identity:131/539 - (24%)
Similarity:224/539 - (41%) Gaps:164/539 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LAQIGVYASVSFLVVSAVGAA-----------LYTTCSKRYRLNWFEQNLLESANE--------- 66
            :.:||....:|.::...:||.           |:|.|.|.|....::.:.::|.:.         
Zfish     4 MTEIGAAYDMSPVLAGFIGAGVLVVAVFALIYLWTCCQKHYNRTNYKLHGIQSEHSDPLTDPPYK 68

  Fly    67 -------------------------KDEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSP 106
                                     ::...|....|.|:.|..|..||     ..|:..:|.|..
Zfish    69 FIHMLKGMSIYPDALTNSKRIIRVAREARAQTSDRVQGSKGRPVVLVN-----MDSAAESGLLGE 128

  Fly   107 TSLKSEDND----------PAFWVPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCST 161
            ..::.|::.          |.......:.|::|...|.|:||                    .|:
Zfish   129 KQMRLEESGHEVSRLERELPVRADYCCLDSSSASSSQTSSTT--------------------VSS 173

  Fly   162 TSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSL 226
            |:.|...:|:       ||                                      ||:|.:::
Zfish   174 TATPFTPADE-------PS--------------------------------------RGDLSIAI 193

  Fly   227 GYDPVGGLLNVRLLEAQNLQPRQ-FSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVF- 289
            .|:.....|.|.:|||:.|...: .:|:||||.|:.:||:||:..:||:.::||.|.|||.|.| 
Zfish   194 DYNFPKKALVVTILEARGLPAVEGQTGSADPYVKMTILPEKKHRVKTRVLRKTLEPAFDETFTFY 258

  Fly   290 EVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLD-------LSEQLKLWTPLSSASAQDM 347
            .|....:...|:..|:..||.:||...||.:.:.||.:|       :::|:         :.::|
Zfish   259 GVPYSSLSDLTLHFLVLSFDRFSRDDVIGEAMVPLAGVDPSTGRVHITQQI---------TKRNM 314

  Fly   348 K-VDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQ 411
            : |..|:::|||:|.|.:.||.||::||::|..:|....|::||||:.:. .|.|:|.|:||.|:
Zfish   315 QCVSHGELLVSLSYQPVSHRLSVVVLKAKHLPKLDITGLSANPYVKLNVF-YGHKRIAKKKTHVK 378

  Fly   412 RGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG-NSPEVRTEEKIFFEEV 475
            :.|||||:||:..:||..|.|.:..:||.|:.......::.|||.::| :||             
Zfish   379 KCTLNPVFNESFIYDVPAELLPDISIEFLVMDFDRTTKNQALGRLVLGADSP------------- 430

  Fly   476 FRAKNATAQWVPLQEPANN 494
              ..:..|.|   ||...|
Zfish   431 --CPSGAAHW---QEVCQN 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 43/131 (33%)
C2B_Synaptotagmin 352..488 CDD:175975 48/136 (35%)
syt11bNP_001156003.1 C2 186..309 CDD:472691 42/122 (34%)
C2B_Synaptotagmin-4 320..456 CDD:176049 51/144 (35%)

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