DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Mctp1

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_006517525.3 Gene:Mctp1 / 78771 MGIID:1926021 Length:987 Species:Mus musculus


Alignment Length:30 Identity:8/30 - (26%)
Similarity:16/30 - (53%) Gaps:3/30 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FSLNEHCNS---ANNSGFFKPGQVNDNLRI 94
            |.||.|.::   ...||.|:.|.:..::::
Mouse   194 FVLNFHADTELGKKKSGLFRRGSLLGSMKL 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033
C2B_Synaptotagmin 352..488 CDD:175975
Mctp1XP_006517525.3 C2A_MCTP_PRT 260..381 CDD:176007
C2B_MCTP_PRT 459..574 CDD:176022
C2C_MCTP_PRT 614..732 CDD:176023
PRT_C <875..960 CDD:337028
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.