DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Tc2n

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001076445.1 Gene:Tc2n / 74413 MGIID:1921663 Length:489 Species:Mus musculus


Alignment Length:500 Identity:92/500 - (18%)
Similarity:155/500 - (31%) Gaps:220/500 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 TGSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSS----MNAKL--DHTKIDMTLYR---S 203
            :.|...||:.....|||.:              :|:|..    :.:||  |..::...:.|   |
Mouse    32 SASSSQNTIGIPPLTSVLV--------------KPQVGCNEDYLLSKLPCDGKEVQFVVPRFKLS 82

  Fly   204 HSQPKTIN-PVSLNEVRGNLHVSLG------------------YDPVGGLLNVRLLEAQNLQPRQ 249
            :.||:|.. |..|:|:.|:...|.|                  |:|.             ...:.
Mouse    83 YIQPRTQGIPSHLDELEGSARASFGDQKTELCSSFYHGPSYDVYNPC-------------YMYQH 134

  Fly   250 FSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRH 314
            ||    |....|.||          |..|.          ::...|.|.||.::           
Mouse   135 FS----PDLSRRFLP----------HCETK----------QLYGSVCDLRTSKL----------- 164

  Fly   315 VCIGGSKLHLANLDLSEQLKLW---------TPLSSASAQDM---------------KVDLGDIM 355
              .|.|.|..:.|||:...:.:         .|.||:|.::.               :.|||.:.
Mouse   165 --PGSSGLSKSMLDLTTSSQRFIQRHDSFSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLN 227

  Fly   356 VSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVK--VTLLGP---------GGKKIKKRKTG 409
            |.|.|..|||::.:.:::.|::.......::....:|  :||..|         |...|:..:|.
Mouse   228 VKLFYNSSAEQIWITVLQCRDISWPSSYGDTPTISIKGILTLSKPVHFKSSAKEGSNAIEFMETF 292

  Fly   410 VQRGTLNPVYNEALAFDV-----AKETLKNCVL----------EFTV------------------ 441
            |....|..:....|||.:     .|:|:..|.|          |:::                  
Mouse   293 VFAIKLQNLQAVRLAFKIQTQTPKKKTIGECSLSLRTLSTQEMEYSLEIIAPSKISVCQAELELG 357

  Fly   442 --------------------------------VHDGLLGSSEIL-----------------GRTL 457
                                            |..|:..|.|::                 |.|:
Mouse   358 TCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVGMFSSGELIYKKKTRLLKASSGRVKWGETM 422

  Fly   458 IGNSPEVRTEEKIFF------EEVFRAKNATAQ-WVPLQEPANNL 495
            |  .|.::||::|.|      ....|.|:...| |:  .|.:||:
Mouse   423 I--FPLIQTEKEIVFLIKLYSRSSVRRKHFVGQLWI--SEDSNNI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 24/149 (16%)
C2B_Synaptotagmin 352..488 CDD:175975 41/235 (17%)
Tc2nNP_001076445.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..214 4/24 (17%)
C2A_Tac2-N 239..341 CDD:176066 18/101 (18%)
C2B_Tac2-N 352..486 CDD:176074 19/115 (17%)
Nuclear localization signal 446..448 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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