DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and SYT4

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_065834.1 Gene:SYT4 / 6860 HGNCID:11512 Length:425 Species:Homo sapiens


Alignment Length:418 Identity:118/418 - (28%)
Similarity:191/418 - (45%) Gaps:78/418 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LSPTSLKSEDND---------PAFWVPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYC 159
            ::|.:...|:.|         .||.:..:|:..|.|..|..::.....||......||...:...
Human     1 MAPITTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVLKGVDIYPE 65

  Fly   160 STTS-VPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKT-------------- 209
            :..| ......||:.|    .::|.|...:..||..|.|:    :.:.|||              
Human    66 NLNSKKKFGADDKNEV----KNKPAVPKNSLHLDLEKRDL----NGNFPKTNLKPGSPSDLENAT 122

  Fly   210 -----------INPVSL-----------NEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPR-QFS 251
                       ::|.||           .|..|.|..||.|:.......|.:.||:.|... :.|
Human   123 PKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQS 187

  Fly   252 GTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGV----IDKRTVEILLYDFDAYS 312
            .|:|||.|:.:||:||:..:||:.::||:|.|||.|.|   .|:    |.:..:...:..||.:|
Human   188 MTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTF---YGIPYTQIQELALHFTILSFDRFS 249

  Fly   313 RHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDL------GDIMVSLAYLPSAERLMVVL 371
            |...||...:.|:.::|||...|      .:.:.:|.::      |::::||.|..:...|.||:
Human   250 RDDIIGEVLIPLSGIELSEGKML------MNREIIKRNVRKSSGRGELLISLCYQSTTNTLTVVV 308

  Fly   372 IKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCV 436
            :|||:|. ..|....|||||||.|. ...|:|.|:||.|::.|.|.|:||...||:..|.|::..
Human   309 LKARHLP-KSDVSGLSDPYVKVNLY-HAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDIS 371

  Fly   437 LEFTVVHDGLLGS-SEILGRTLIGNSPE 463
            :||.|: |...|| :|::|:.::|.:.|
Human   372 VEFLVL-DSERGSRNEVIGQLVLGAAAE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 42/127 (33%)
C2B_Synaptotagmin 352..488 CDD:175975 45/113 (40%)
SYT4NP_065834.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..147 3/19 (16%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 42/134 (31%)
C2B_Synaptotagmin-4 288..423 CDD:176049 45/114 (39%)

Return to query results.
Submit another query.