DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt11

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_006232810.1 Gene:Syt11 / 60568 RGDID:62042 Length:430 Species:Rattus norvegicus


Alignment Length:495 Identity:131/495 - (26%)
Similarity:216/495 - (43%) Gaps:100/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DISLAQIGVYASVSFLVVSAVGAALYTTC----SKRYR------------LNWFEQNLLESANEK 67
            |:|....|:..:...:|..:|...::|.|    .|:::            ::.:.:.|   :|:|
  Rat    12 DVSPVAAGLIGASVLVVCVSVTVFVWTCCHQQAEKKHKTPPYKFIHMLKGISIYPETL---SNKK 73

  Fly    68 DEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNL---SPTSLKSEDNDPAFWVPASVTSTAA 129
                            .:..|.....|.:.....|||   :.:.|.|.|.||....|||......
  Rat    74 ----------------KIIKVRRDKDGSHRESGRGNLLVNAESGLLSHDRDPRGPSPASCIDQLP 122

  Fly   130 IQQQVSNTTEESAPPTSPT-GSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDH 193
            |::....  |..:|.||.| |..|..:                       ||.|....|...|  
  Rat   123 IKRDYGE--ELRSPMTSLTPGESKPTS-----------------------PSSPEEDVMLGSL-- 160

  Fly   194 TKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYA 258
                 |....::.||....|::.|..| |.|..|                     |..| :|||.
  Rat   161 -----TFSVDYNFPKKALVVTIQEAHG-LPVMDG---------------------QTQG-SDPYI 197

  Fly   259 KVRLLPDKKNFWQTRIHKRTLNPVFDEQFVF-EVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKL 322
            |:.:||||::..:||:.::||:|||||.|.| .:....:....:..|:..||.:||...||...:
  Rat   198 KMTILPDKRHRVKTRVLRKTLDPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMV 262

  Fly   323 HLANLDLSE-QLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNS 386
            .||.:|.|. :::|...:...:.|.. :..|::.|||:|.|.|:|:.||::|||:|..:|....|
  Rat   263 PLAGVDPSTGKVQLTRDIIKRNIQKC-ISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLS 326

  Fly   387 SDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSE 451
            .:|||||.:. .|.|:|.|:||.|::.||||::||:..:|:..:.|.:..:||.|:.......:|
  Rat   327 GNPYVKVNVY-YGRKRIAKKKTHVKKCTLNPIFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNE 390

  Fly   452 ILGRTLIGNSPEVRTEEKIFFEEVFRA-KNATAQWVPLQE 490
            ::||.::| :..|.|.....:.||..: :...|:|..|.|
  Rat   391 VVGRLILG-AHSVTTSGAEHWREVCESPRKPVAKWHSLSE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 37/124 (30%)
C2B_Synaptotagmin 352..488 CDD:175975 49/136 (36%)
Syt11XP_006232810.1 C2A_Synaptotagmin-4-11 157..282 CDD:176034 43/154 (28%)
C2B_Synaptotagmin-4 291..428 CDD:176049 49/138 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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