DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt8

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_445777.2 Gene:Syt8 / 60566 RGDID:68399 Length:387 Species:Rattus norvegicus


Alignment Length:316 Identity:98/316 - (31%)
Similarity:150/316 - (47%) Gaps:38/316 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 RSHSQPKTINPVSLNEVR-------------------------GNLHVSLGYDPVGGLLNVRLLE 241
            |...|||....|.|...|                         |.|.:||.||.....:.|.|.:
  Rat    64 RHRKQPKDKETVGLGSARNSTTTHLVQPDVECLEPCSGGDQPWGQLLLSLEYDFGSQEIRVGLRQ 128

  Fly   242 AQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLY 306
            |:||:.   .|||||||:|.:........:|::|:.||.|:|:|...|.|....:.|.|:::.|.
  Rat   129 AKNLKA---EGTADPYARVSVSTQAGRRHETKVHRGTLCPMFEETCCFLVPPAELPKATLKVQLL 190

  Fly   307 DFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVL 371
            ||..:|.|..:|..:|.|..:||...|:.|..|....:.:.: .:|::..||.|:||:.||.||:
  Rat   191 DFKRFSEHEPLGELQLPLGTVDLQHVLESWYQLGPPGSTESE-QMGELCFSLRYVPSSGRLTVVI 254

  Fly   372 IKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCV 436
            ::||.|.     ...::.||||.|: ...:|.||.||..::||.||.:|||..|.|....|::..
  Rat   255 LEARGLN-----PGLAEAYVKVQLI-LNQRKWKKNKTSSKKGTTNPYFNEAFVFLVPVSQLQSMD 313

  Fly   437 LEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVF-RAKNATAQWVPLQEP 491
            |...|...||...:|.:|:.|:|  |....:....:.::. .|:...|||..|:.|
  Rat   314 LVLAVWARGLQLLAEPVGKVLLG--PRASGQPLQHWADMLAHARRPIAQWHHLRSP 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 44/147 (30%)
C2B_Synaptotagmin 352..488 CDD:175975 46/136 (34%)
Syt8NP_445777.2 Syt1_2_N <27..72 CDD:425364 4/7 (57%)
C2 107..225 CDD:417471 43/120 (36%)
C2 234..364 CDD:417471 46/137 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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