DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Doc2g

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_068563.2 Gene:Doc2g / 60425 MGIID:1926250 Length:387 Species:Mus musculus


Alignment Length:380 Identity:93/380 - (24%)
Similarity:163/380 - (42%) Gaps:78/380 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 PASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARS-DKHVVLA-MHPSRPR 183
            |||.....::|:.::  .:.|..|..|. .|.||...:......|:.|: |:..:|| ..||.|:
Mouse     6 PASGRQRVSMQEHMA--IDVSPGPIRPI-RLISNYFPHFYPFLEPVLRAPDRQAMLAPAIPSAPQ 67

  Fly   184 VSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPR 248
            :.. |.:.:....|.|                  ..|.|..:|.:|.....|:.....|:.|:| 
Mouse    68 LQP-NPEPEGDSDDST------------------ALGTLEFTLLFDEDNSALHCTAHRAKGLKP- 112

  Fly   249 QFSGTADPYAKVRLLP--DKKNFWQTRIHKRTLNPVFDEQFVFE-VTAGVIDKRTVEILLYDFD- 309
            ..:|:.|.|.|..|||  .|.:..:||..:.|..||::|...:. .|.....::|:.:.:.:.. 
Mouse   113 PAAGSVDTYVKANLLPGASKASQLRTRTVRGTREPVWEETLTYHGFTCQDAGRKTLRLCVCEDSR 177

  Fly   310 ------------------------AYSRHVCIGGSKL--HLANLDLSEQLKLWTPLSSASAQDMK 348
                                    |.|..:|:...||  ...:||.:..:.|:      ..::|:
Mouse   178 LRRRRRGPPLGELRVPLRKLVPNRARSFDICLEKRKLTKRPKSLDTARGMSLY------EEEEME 236

  Fly   349 VDL-----GDIMVSLAYLPSAER--LMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKR 406
            .::     |.|::||.|  |:||  |:|.:::..:|..: ||...|||:|::.|....||| .|.
Mouse   237 AEVFGEERGRILLSLCY--SSERGGLLVGVLRCVHLAPM-DANGYSDPFVRLFLHPSSGKK-SKY 297

  Fly   407 KTGVQRGTLNPVYNEALAF-----DVAKETLKNCVLEFTV-VHDGLLGSSEILGR 455
            ||.|:|.||||.:||...:     ::|::.|...|.::.: ..|..:|..::.||
Mouse   298 KTSVRRKTLNPEFNEEFFYAGHREELAQKALLVSVWDYDLGTADDFIGGVQLSGR 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 32/152 (21%)
C2B_Synaptotagmin 352..488 CDD:175975 39/112 (35%)
Doc2gNP_068563.2 C2A_Rabphilin_Doc2 84..209 CDD:176000 26/125 (21%)
C2 246..378 CDD:472691 38/111 (34%)

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