DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Doc2g

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_068563.2 Gene:Doc2g / 60425 MGIID:1926250 Length:387 Species:Mus musculus


Alignment Length:380 Identity:93/380 - (24%)
Similarity:163/380 - (42%) Gaps:78/380 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 PASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARS-DKHVVLA-MHPSRPR 183
            |||.....::|:.::  .:.|..|..|. .|.||...:......|:.|: |:..:|| ..||.|:
Mouse     6 PASGRQRVSMQEHMA--IDVSPGPIRPI-RLISNYFPHFYPFLEPVLRAPDRQAMLAPAIPSAPQ 67

  Fly   184 VSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPR 248
            :.. |.:.:....|.|                  ..|.|..:|.:|.....|:.....|:.|:| 
Mouse    68 LQP-NPEPEGDSDDST------------------ALGTLEFTLLFDEDNSALHCTAHRAKGLKP- 112

  Fly   249 QFSGTADPYAKVRLLP--DKKNFWQTRIHKRTLNPVFDEQFVFE-VTAGVIDKRTVEILLYDFD- 309
            ..:|:.|.|.|..|||  .|.:..:||..:.|..||::|...:. .|.....::|:.:.:.:.. 
Mouse   113 PAAGSVDTYVKANLLPGASKASQLRTRTVRGTREPVWEETLTYHGFTCQDAGRKTLRLCVCEDSR 177

  Fly   310 ------------------------AYSRHVCIGGSKL--HLANLDLSEQLKLWTPLSSASAQDMK 348
                                    |.|..:|:...||  ...:||.:..:.|:      ..::|:
Mouse   178 LRRRRRGPPLGELRVPLRKLVPNRARSFDICLEKRKLTKRPKSLDTARGMSLY------EEEEME 236

  Fly   349 VDL-----GDIMVSLAYLPSAER--LMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKR 406
            .::     |.|::||.|  |:||  |:|.:::..:|..: ||...|||:|::.|....||| .|.
Mouse   237 AEVFGEERGRILLSLCY--SSERGGLLVGVLRCVHLAPM-DANGYSDPFVRLFLHPSSGKK-SKY 297

  Fly   407 KTGVQRGTLNPVYNEALAF-----DVAKETLKNCVLEFTV-VHDGLLGSSEILGR 455
            ||.|:|.||||.:||...:     ::|::.|...|.::.: ..|..:|..::.||
Mouse   298 KTSVRRKTLNPEFNEEFFYAGHREELAQKALLVSVWDYDLGTADDFIGGVQLSGR 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 32/152 (21%)
C2B_Synaptotagmin 352..488 CDD:175975 39/112 (35%)
Doc2gNP_068563.2 C2A_Rabphilin_Doc2 84..209 CDD:176000 26/125 (21%)
C2 246..378 CDD:301316 38/111 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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