DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and SYT13

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_065877.1 Gene:SYT13 / 57586 HGNCID:14962 Length:426 Species:Homo sapiens


Alignment Length:487 Identity:119/487 - (24%)
Similarity:189/487 - (38%) Gaps:109/487 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VSAVGAALYT----------TCSKRYRLNWFEQNLLESANEKDEDQQREALVAGAVGYNVDNVNE 90
            |.|:||.|.|          ||..|:...  ::.||....:.|.::.:.:|:..|..:||....|
Human     7 VIALGATLGTATSILALCGVTCLCRHMHP--KKGLLPRDQDPDLEKAKPSLLGSAQQFNVKKSTE 69

  Fly    91 V--------------PRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEES 141
            .              ||...::....|.:..||:|                          |||.
Human    70 PVQPRALLKFPDIYGPRPAVTAPEVINYADYSLRS--------------------------TEEP 108

  Fly   142 APPTSPTGSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQ 206
            ..|.||.....|              |..:.|...:.     :...|..::...:          
Human   109 TAPASPQPPNDS--------------RLKRQVTEELF-----ILPQNGVVEDVCV---------- 144

  Fly   207 PKTINP---VSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKN 268
            .:|.||   .|.|:. ..||..|.||.....|.|..|||..   ....|..|.|.:..:.....:
Human   145 METWNPEKAASWNQA-PKLHYCLDYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGS 205

  Fly   269 F-WQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQ 332
            . .||.:.||.|:..::|..|..:....:...|:.:.|...|.:|||...|..:|.|....:...
Human   206 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLG 270

  Fly   333 LKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSS------DPYV 391
            ...|..|.: ||::.....|::::|::|||:|.||:||||||:||.     .|.|      |..|
Human   271 AAQWGELKT-SAKEPSAGAGEVLLSISYLPAANRLLVVLIKAKNLH-----SNQSKELLGKDVSV 329

  Fly   392 KVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRT 456
            ||||... .:|:||::|...:..:|||:||.:.|::..:.|:...:|..|:.....|.|..||..
Human   330 KVTLKHQ-ARKLKKKQTKRAKHKINPVWNEMIMFELPDDLLQASSVELEVLGQDDSGQSCALGHC 393

  Fly   457 LIGNSPEVRT--EEKIFFEEVFR-AKNATAQW 485
            .:|    :.|  .|:..:||:.: .:...|.|
Human   394 SLG----LHTSGSERSHWEEMLKNPRRQIAMW 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 31/123 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 48/143 (34%)
SYT13NP_065877.1 C2A_Synaptotagmin-13 160..277 CDD:176059 30/119 (25%)
C2B_Synaptotagmin-13 288..425 CDD:176052 48/144 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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