DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and sytl2b

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_701277.6 Gene:sytl2b / 572466 ZFINID:ZDB-GENE-121214-363 Length:1737 Species:Danio rerio


Alignment Length:501 Identity:107/501 - (21%)
Similarity:202/501 - (40%) Gaps:111/501 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 AGAVGYNVDNVNE--VPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQ------- 133
            :|::|:::....:  :.:|..:..|. :|...:||...:.|.:.......|:.|.|.|       
Zfish  1270 SGSLGHHLTTQTDGNIIKGIQNRENE-SLIQKALKRASSRPVYHKSMEDISSIARQDQKLKQTDD 1333

  Fly   134 -------VSNTTEESAPPTSPTGSLKSNTLSY-----------------CSTTSVPIARSDKHVV 174
                   .|:|..:::..|:....:|..:.|.                 .|..|||...:.:...
Zfish  1334 YMHDNYDASSTHLQTSFSTADPEHMKKLSKSVPSFLEKESDGGESDSESSSRGSVPKWNNRQFTN 1398

  Fly   175 LAMHPSRPRVSSMNAKL------DHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGG 233
            |:.:.....:||::..:      |:..:|                    |:|::..||.|.....
Zfish  1399 LSNYSGSTSLSSVSGSVASVYTSDYNSVD--------------------VQGSIQFSLNYVHKLR 1443

  Fly   234 LLNVRLLEAQNLQPRQFS-GTADPYAKVRLLPDKKNFW--QTRIHKRTLNPVFDEQFVFEVTAGV 295
            ..::.:::.|||...... ..:|||.|..|:||..|..  :|.:.|:||||.::|...:.|....
Zfish  1444 EFHIFVVQCQNLAAVDAKRNRSDPYVKSYLIPDPANLGKRKTAVKKKTLNPTYNEILRYRVRMEY 1508

  Fly   296 IDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPL----------SSASAQDMKVD 350
            :..:.:.:..:..|.:.|:..:|..:|.|:..|.::..:...||          :|....|:|  
Zfish  1509 LTSQVLNLSAWHNDMFGRNSFLGEIELDLSTWDFNDTERKLLPLKPRNLFIQTTNSLQPSDLK-- 1571

  Fly   351 LGDIMVSLAYL---------PSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKR 406
             |.:.:::.:|         |.:..:.:.:...:||.::...  :.|||||..:| |...|..::
Zfish  1572 -GQMRLAIRFLPQISHSKNVPGSGEVHIWVKDCKNLPLIRSP--TIDPYVKCFVL-PDTSKKSRQ 1632

  Fly   407 KTGVQRGTLNPVYNEALAFD-VAKETLKNCVLEFTVVHDGLLGSSEILGRTL---IGNSPEVR-- 465
            ||.|.:.|.||::|..:.:| ...|.||...:|.||.....|.|..:.|..|   .|.|..|:  
Zfish  1633 KTRVLKRTTNPIFNHTMVYDGFRAEDLKEACVELTVWDRDRLASHSLGGLRLGMGTGRSYGVQVD 1697

  Fly   466 -----TEEKIFFEEVFRAKNATAQWV----PLQEPANNLATSAKSS 502
                 |||...:.   |..|:..:||    ||:     :.|:||::
Zfish  1698 WMDSTTEEVALWR---RMMNSPNEWVEDILPLR-----MITAAKNT 1735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 32/135 (24%)
C2B_Synaptotagmin 352..488 CDD:175975 41/159 (26%)
sytl2bXP_701277.6 PHD_SF 5..>47 CDD:304600
C2 1429..1553 CDD:301316 30/123 (24%)
C2B_SLP_1-2-3-4 1571..1727 CDD:175987 43/164 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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