DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt2a

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_021325566.1 Gene:syt2a / 567877 ZFINID:ZDB-GENE-060503-315 Length:430 Species:Danio rerio


Alignment Length:413 Identity:128/413 - (30%)
Similarity:212/413 - (51%) Gaps:45/413 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ASVTSTAAIQQQVSNTTEESAPPTSPT--GSLKSNTLSYCSTTSVP----IARSDKHVVLAM--- 177
            :::|...|:.....|:||...|.:...  |.:|:..|:......:|    ||.:...|||.:   
Zfish    22 SALTMAPAVSTPADNSTEHQGPVSKNDVFGDIKNKFLNEMDKLPLPPWAIIAIAIVAVVLILTCC 86

  Fly   178 -----------------HPSRPRVSSMNAK--------LDHTKIDMTL-YRSHSQPKTINPVSLN 216
                             ...:..:...|.|        .|...|||.: .....:||.      .
Zfish    87 FCIVKKTCLKKKKGKKGKKGKGDMGMKNMKGGEKQEEDDDEEDIDMGITEEKEEEPKE------K 145

  Fly   217 EVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNP 281
            |..|.|..||.||.....|.|.:|:|.:|......||:|||.||.:|||||..:.|::||:||||
Zfish   146 EKLGKLQFSLDYDFSASQLTVGILQAADLLSMDSGGTSDPYVKVFILPDKKKKYDTKVHKKTLNP 210

  Fly   282 VFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQD 346
            ||:|.|.|::....:..:|:.:.:||||.:|:|..||..|:.:..|||::.::.|..|.||..::
Zfish   211 VFNETFHFKIPFTEMGGKTLVMSVYDFDRFSKHDVIGEVKIPMNTLDLAQPIEQWRDLDSAEKEE 275

  Fly   347 MKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQ 411
            .: .||||.:||.|:|:|.:|.:.:::|:||:.: |....||||||:.|| ..||::||:||.|:
Zfish   276 PE-KLGDICISLRYVPTAGKLTICILEAKNLKKM-DVGGLSDPYVKIHLL-QNGKRLKKKKTTVK 337

  Fly   412 RGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVF 476
            :.||||.|||:.:|::.::.::......||:....:|.::.:|:..:|:..: .||.:.:.:.:.
Zfish   338 KNTLNPYYNESFSFEIPQDQMQKIQAVITVLDYDKIGKNDAIGKIWVGSKAQ-GTELRHWSDMLA 401

  Fly   477 RAKNATAQWVPLQEPANNLATSA 499
            ..:...|||.||:......||.|
Zfish   402 NPRRPIAQWHPLKPEEEVDATLA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 50/122 (41%)
C2B_Synaptotagmin 352..488 CDD:175975 46/135 (34%)
syt2aXP_021325566.1 C2A_Synaptotagmin-1-5-6-9-10 148..270 CDD:176031 50/121 (41%)
C2B_Synaptotagmin-1 279..414 CDD:176047 48/137 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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