DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and rph3ab

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_073763702.1 Gene:rph3ab / 563377 ZFINID:ZDB-GENE-090706-3 Length:602 Species:Danio rerio


Alignment Length:365 Identity:92/365 - (25%)
Similarity:163/365 - (44%) Gaps:59/365 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 SEDNDPAFWVPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSDKHVV- 174
            |||.|     |||..:|..:.::..|........:|....|:|:...|...:|....|.:...| 
Zfish   213 SEDGD-----PASPQNTPVMMKKTVNVHAARPVSSSTAAGLESDRGVYPPLSSGSADREELKSVS 272

  Fly   175 --LAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNV 237
              :|.|.:.|.|...:....:...:.|                  ..|:|..:|.||.....|:.
Zfish   273 PRVAQHQNAPSVDDDDEANSYDSDEAT------------------TLGSLEFTLLYDQGNSSLHC 319

  Fly   238 RLLEAQNLQPRQFSGTADPYAKVRLLP--DKKNFWQTRIHKRTLNPVFDEQFVFE-VTAGVIDKR 299
            .:::|:.|:|...:|.||||.|:.|||  .|....:|:..:.|.||.::|..|:. :|...:.::
Zfish   320 NIIKAKGLKPMDSNGLADPYVKLHLLPGASKSTKLRTKTLRNTRNPTWNETLVYHGLTDEDMQRK 384

  Fly   300 TVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLK--------LWTPLSSASAQDMKVDL----- 351
            |:.:.:.|.|.:..:..||.:::.|..|.::::..        :.|..||.:.....:.|     
Zfish   385 TLRLSVCDEDKFGHNEFIGETRVALKKLKINQKKNFNICLERVVQTKRSSTAGGARGITLYEDET 449

  Fly   352 ----------GDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKR 406
                      |.|::||.|.....||:|.:::..:|..: ||...|||:||:.|....||| .|.
Zfish   450 GKDGSELEERGRILISLMYSTQLGRLIVGVVRCVHLAAM-DANGYSDPFVKICLKPDMGKK-AKN 512

  Fly   407 KTGVQRGTLNPVYNEALAFDV-----AKETLKNCVLEFTV 441
            ||.:::.||||.:||..::::     ||:||...|.::.:
Zfish   513 KTQIKKKTLNPEFNEEFSYEIKHAELAKKTLDISVWDYDI 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 34/133 (26%)
C2B_Synaptotagmin 352..488 CDD:175975 34/95 (36%)
rph3abXP_073763702.1 None

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