DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and sytl2a

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_009303749.1 Gene:sytl2a / 563188 ZFINID:ZDB-GENE-130723-2 Length:1447 Species:Danio rerio


Alignment Length:485 Identity:112/485 - (23%)
Similarity:204/485 - (42%) Gaps:111/485 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LESANEKD-------ED------QQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSE 112
            ||.||.:.       ||      |:|         :..|..|:|   :.|..|...:.|.: |:.
Zfish  1009 LERANARPISISKSLEDLASTPSQER---------WKTDPRNDV---RMSMENVSAVPPNT-KTS 1060

  Fly   113 DNDPAFWVPASVTSTAAIQQQVSNTTEESAPPTS--PTGSLKSNTLSYCSTTSVPIARSDKHVVL 175
            .:||......|::..|.:||::.....:.|..:|  .......||.|..||.|            
Zfish  1061 FSDPEQVKMMSLSVPALMQQEMECRNSDCASVSSFYNDRQRSCNTPSNFSTCS------------ 1113

  Fly   176 AMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLL 240
                   .|:||::.   |...|::|.|.        ....||:|.:..::.|....|..::.::
Zfish  1114 -------EVASMSSV---TGSVMSIYSSE--------FGYVEVKGTVQFAIHYVQKLGEFHIFVV 1160

  Fly   241 EAQNLQPRQFS-GTADPYAKVRLLPDKKNFW--QTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVE 302
            :.::|...... ..:|||.|..|||||..:.  :|.:.|:||:|.::|...|::...::..:.:.
Zfish  1161 QCKDLAVADVKRNRSDPYVKCYLLPDKAKYGKKKTCVRKKTLDPTYNEILRFKIPMEMLKTQKLN 1225

  Fly   303 ILLYDFDAYSRHVCIGGSKLHLA-----NLDLSEQL---KLWTPLS---SASAQDMKVDLGDIMV 356
            |.::..|.:.|:..:|..::.||     |..::|.|   ::..|.|   |...::|.   .:|.|
Zfish  1226 ISVWHNDTFGRNSFLGEVEVDLAEWDFNNTQMNEYLLKGRVQIPTSPKHSFGGEEMS---AEIKV 1287

  Fly   357 SLAYLPSAE---------RLMVVLIKARNLRIVDDARN-SSDPYVKVTLLGPGGKKIKKRKTGVQ 411
            :|.:||...         .:.:.:.:.:||.|   :|. :.||:||..:| |...:..::||.|.
Zfish  1288 ALRFLPQTTLSHKNKGNGEVQIWVKECKNLPI---SRGVAIDPFVKCAIL-PENNRKSRQKTRVL 1348

  Fly   412 RGTLNPVYNEALAFD-VAKETLKNCVLEFTV-VHDGLLGSSEILGRTLIG-----------NSPE 463
            :...|||:|..:.:| ...:.||:..:|.|| .||.|  ::..:|...:|           |..:
Zfish  1349 KRAPNPVFNHTMVYDGFGHDDLKDICVELTVWDHDRL--NNHFIGGIRLGPGTGKSYGSEVNWMD 1411

  Fly   464 VRTEEKIFFEEVFRAKNATAQWV----PLQ 489
            ....|...:|.:.:.:|   :||    ||:
Zfish  1412 SNVAEAALWERMVQTQN---EWVEDTLPLR 1438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 32/136 (24%)
C2B_Synaptotagmin 352..488 CDD:175975 39/162 (24%)
sytl2aXP_009303749.1 PHD_SF 5..>37 CDD:328929
C2A_SLP-1_2 1139..1263 CDD:176039 29/123 (24%)
C2B_SLP_1-2-3-4 1283..1438 CDD:175987 40/163 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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