DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and syt6b

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_021328166.1 Gene:syt6b / 562928 ZFINID:ZDB-GENE-090601-3 Length:504 Species:Danio rerio


Alignment Length:497 Identity:156/497 - (31%)
Similarity:239/497 - (48%) Gaps:75/497 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SVSFLVVSAVGAALYTTCS----KRYRLNWFEQNLLESA-----NEKDEDQQREALVAGAVGYNV 85
            |:..||....|.||....|    |...::|..:.|..||     .:.:.:|.||.      |:  
Zfish    19 SLLLLVFVVCGLALLGVISVATWKLCWVSWRSKVLSSSATALAPTQPEREQPREE------GH-- 75

  Fly    86 DNVNEVPRGKYSSG-----------NAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTE 139
                    |.|...           :.||....::|.....|.  :||.|  ..:::..:...|.
Zfish    76 --------GDYYPALRDIMAADKLKDPGNFLEAAVKISHTSPD--IPADV--QLSMKDHLLRRTR 128

  Fly   140 ESAPPTSPTGSLKSNTLSYCSTTSVPIARSDKHVVLAMH--PSRPRVSSMNAKLDHT-------- 194
            .|...|.|..|.:.::..             ||:...||  .|..|.|......||.        
Zfish   129 ISRQTTEPASSNRHSSFK-------------KHLPRQMHHVTSLDRGSEFLDVEDHPSCTAASLG 180

  Fly   195 KIDMTLYR-SHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYA 258
            :|...||: |..:.:..:....::..|.::.||.||..|.||.|.:|:|.:|..:...|::|||.
Zfish   181 RIQPELYKQSTMEAEDSSKNDTDKSCGKINFSLKYDYEGELLLVTILKAFDLPAKDLCGSSDPYV 245

  Fly   259 KVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLH 323
            |:.||||:|..:|||:|::||||.|||.|.|.|....:..|.:.:.::|||.:|||..||  ::.
Zfish   246 KIYLLPDRKRKFQTRVHRKTLNPTFDETFQFPVPYEELGSRKLHLSVFDFDRFSRHDMIG--EVI 308

  Fly   324 LANL----DLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDAR 384
            |.||    |||.:..:|..:..|:::  .||||:||.||.|||:|.||.:.:||.|||:.: |..
Zfish   309 LENLFEVSDLSRETSIWKDIQYATSE--SVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAM-DIT 370

  Fly   385 NSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGS 449
            ..|||||||:|: ..|:::||:||.:::.||||.||||:.||:..|.:....|..:|:...|:|.
Zfish   371 GYSDPYVKVSLI-CDGRRLKKKKTSIKKNTLNPTYNEAIIFDIPPENMDQVSLHISVMDYDLVGH 434

  Fly   450 SEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQEP 491
            :||:|...:|...|....:. :.|.:...:...|.|.||.||
Zfish   435 NEIIGVCRVGIHAEGLGRDH-WNEMLAYPRKPIAHWHPLVEP 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 52/126 (41%)
C2B_Synaptotagmin 352..488 CDD:175975 53/135 (39%)
syt6bXP_021328166.1 C2A_Synaptotagmin-1-5-6-9-10 206..330 CDD:176031 52/125 (42%)
C2B_Synaptotagmin-3-5-6-9-10 339..472 CDD:176048 53/135 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.780

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