DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and sytl5

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_686619.6 Gene:sytl5 / 558324 ZFINID:ZDB-GENE-070912-424 Length:692 Species:Danio rerio


Alignment Length:437 Identity:108/437 - (24%)
Similarity:181/437 - (41%) Gaps:97/437 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GNLSPTSLKSEDNDPAFW----------VPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTL 156
            |..|.:|::|.|:.|...          .|:...|.|::....|.:..:.:.|..  |..:...:
Zfish   223 GAESVSSIQSSDSVPEKMADGRRQTDSSTPSIAVSRASLSSDRSRSEVDLSNPGE--GLSEDPLI 285

  Fly   157 SYCSTTSVP---IARSDKHV--VLAMH----------------PSRPR----VSSMNAKLDHTKI 196
            |.|  .|||   ...||:.:  ||:.|                |:..|    ::..::..|.|.|
Zfish   286 SRC--RSVPGLNDGDSDEDIDAVLSAHYKTNRSVCSAQSMSSTPASERKWGFLNVPDSDADTTSI 348

  Fly   197 D--MTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNL----QPRQFSGTAD 255
            :  |::|.......::      .|.|.:.:::.|....|.|||.:.|.:.|    :.||   ..|
Zfish   349 NSLMSVYSETGDYGSV------RVSGEILLNISYSYKTGALNVLVRECRCLATGDERRQ---RTD 404

  Fly   256 PYAKVRLLPDK--KNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIG 318
            .|.|..|||||  ::..:|.|...:.||||:|...:.|:...::.||:::.::..|.:..:..:|
Zfish   405 AYVKTYLLPDKSRQSKRKTSIKSNSTNPVFNENLRYVVSHSQLETRTLQVSVWHHDRFGHNNFLG 469

  Fly   319 GSKLHLANLDLSEQLKLWTPLSSASAQDMKVD-----LGDIMVSLAYLPSAER------------ 366
            .::|...:.:...|::.|..|......|. ||     .|::.|.|.|:| |||            
Zfish   470 ETELTFDSWEFDTQIEEWFALQPRIESDY-VDSVMHYKGELTVVLKYIP-AERNVSLPLDQVQVK 532

  Fly   367 -----------------LMVVLIK-ARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRG 413
                             ::.:|:| |:||..|..  .||||:||..|| |..||..|.||.|.:.
Zfish   533 KGFLKGKKKTITLPKGGMVELLVKEAKNLTAVKG--GSSDPFVKGYLL-PDDKKSTKHKTAVVKR 594

  Fly   414 TLNPVYNEALAF-DVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG 459
            ::||.:|....: .:....|.:..||.||.......|:..||...:|
Zfish   595 SVNPRWNHTFTYCGLQHSDLDSVCLELTVWDREPFASNVFLGGVRLG 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 35/128 (27%)
C2B_Synaptotagmin 352..488 CDD:175975 41/139 (29%)
sytl5XP_686619.6 PHD_SF 13..124 CDD:304600
C2A_SLP-4_5 367..491 CDD:175995 33/126 (26%)
C2B_SLP_1-2-3-4 506..683 CDD:175987 41/140 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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