DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt5b

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001018382.2 Gene:syt5b / 553567 ZFINID:ZDB-GENE-050522-134 Length:446 Species:Danio rerio


Alignment Length:286 Identity:101/286 - (35%)
Similarity:169/286 - (59%) Gaps:6/286 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 NEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLN 280
            :|..|.|..||.|:.....|.|.:|:||:|......||:|||.||.||||||..::|::.::.|.
Zfish   164 HENLGKLEFSLDYNFTDAQLIVGILQAQDLAAMDIGGTSDPYVKVYLLPDKKKKFETKVQRKNLC 228

  Fly   281 PVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQ 345
            |||:|.|:|::....:..:|:.:.::|||.:.:|..||..|:.:..:||::.|..|..|.:...:
Zfish   229 PVFNETFIFKIPYAELGGKTLVLQVFDFDRFGKHDVIGQIKIPMNCVDLAQPLHEWRELENGEKE 293

  Fly   346 DMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGV 410
            :.|  |||:.:||.|:|:|.:|.|.:::|:||:.: |....||||||: :|...||::||:||.|
Zfish   294 EEK--LGDVCISLRYVPTAGKLTVNIMEAKNLKKM-DVGGLSDPYVKI-VLQHNGKRLKKKKTTV 354

  Fly   411 QRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEV 475
            ::.||||.:||:.:|:|..|.::...|..||.....|||::.:|:|.||.. ......:.:.:.:
Zfish   355 KKNTLNPYFNESFSFEVPFEQIQKVQLLITVYDYDKLGSNDPIGKTFIGYG-ATGVGLRHWSDML 418

  Fly   476 FRAKNATAQWVPLQEPANNLATSAKS 501
            ...:...|||..|| |...:..:.|:
Zfish   419 ANPRRPVAQWHTLQ-PEEEVEAALKA 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 45/122 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 49/135 (36%)
syt5bNP_001018382.2 C2A_Synaptotagmin-1-5-6-9-10 166..285 CDD:176031 43/118 (36%)
C2B_Synaptotagmin-1 298..432 CDD:176047 49/136 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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