DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt10

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_061273.1 Gene:Syt10 / 54526 MGIID:1859546 Length:523 Species:Mus musculus


Alignment Length:509 Identity:158/509 - (31%)
Similarity:248/509 - (48%) Gaps:75/509 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DISLAQIGV---YASVSFLVVSA-VGAALYTTCSKRY----RLNWFEQNLLESANEKDEDQQREA 75
            |||::.:.|   :..::.||||. |...|...|.|..    .|:...|::..:..|..|.::::.
Mouse    51 DISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKLVAPNLSVLPQSISSAPTEVFETEEKKE 115

  Fly    76 LVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEE 140
            :          ..||.|..|       .:.| ::|.....|.  :||.|.:  |:::.:......
Mouse   116 V----------EENEKPAPK-------AIEP-AIKISHTSPD--IPAEVQT--ALKEHLIKHARV 158

  Fly   141 SAPPTSPTGSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMN-------------AKLD 192
            ....|.||.|.:.|:..             :|:     |.:..|||::             .:..
Mouse   159 QRQTTEPTSSSRHNSFR-------------RHL-----PRQMNVSSVDFSVGTEPILQRGETRTS 205

  Fly   193 HTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPY 257
            ..:|...||:..|.....|.....:..|.|:.:|.||....||.|::::|.:|..:.|:||:|||
Mouse   206 IGRIKPELYKQKSVDSEGNRKDDVKTCGKLNFALQYDYENELLVVKIIKALDLPAKDFTGTSDPY 270

  Fly   258 AKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKL 322
            .|:.||||:|..:|||:|::||||:|||.|.|.|....:..|.:...:||||.:|||..||  ::
Mouse   271 VKIYLLPDRKKKFQTRVHRKTLNPLFDELFQFPVVYDQLSNRKLHFSIYDFDRFSRHDMIG--EV 333

  Fly   323 HLANL----DLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDA 383
            .|.||    |||.:..:|..:..|:.:  .:|||:||.||.|||:|.|:.:.:||.|||:.: |.
Mouse   334 ILDNLFEVSDLSREATVWKDIHCATTE--SIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAM-DI 395

  Fly   384 RNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLG 448
            ..||||||||:|:.. |:::|||||..::.|||||||||:.||:..|.:....|...|:....:|
Mouse   396 TGSSDPYVKVSLMCE-GRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLCIAVMDYDRVG 459

  Fly   449 SSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQE-PANNLATSAKS 501
            .:|::|....|...|....:. :.|.:...:.....|.||.| |..  |||..|
Mouse   460 HNEVIGVCRTGLDAEGLGRDH-WNEMLAYHRKPITHWHPLLELPGR--ATSFDS 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 53/126 (42%)
C2B_Synaptotagmin 352..488 CDD:175975 52/135 (39%)
Syt10NP_061273.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 13..35
C2A_Synaptotagmin-1-5-6-9-10 231..356 CDD:176031 53/126 (42%)
C2B_Synaptotagmin-3-5-6-9-10 365..498 CDD:176048 52/135 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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