DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt6

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_006501767.1 Gene:Syt6 / 54524 MGIID:1859544 Length:529 Species:Mus musculus


Alignment Length:479 Identity:147/479 - (30%)
Similarity:233/479 - (48%) Gaps:83/479 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EEDISLAQIGVYASVSFLVVSAVGAALYTT-CSKRYRLNWFEQNLLESANEKDEDQQREALVAGA 80
            |:..|.|..|...|:..:||...|.||... ....::|.|......|:::....:...|.|    
Mouse    46 EQSPSAADSGTSVSLLAVVVIVCGVALVAVFLFLFWKLCWMPWRKKEASSPSSANPASETL---- 106

  Fly    81 VGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAPPT 145
                           .|..:.||::.   |.:|.....::.|:|        ::|:|:.:.  |.
Mouse   107 ---------------QSPSSRGNMAD---KLKDPSALGFLEAAV--------KISHTSPDI--PA 143

  Fly   146 SPTGSLKSNTLSYCS---TTSVPIARSDKHVVLAMH-PSRPRVSSMNAKLDHTKIDMTLYRSHSQ 206
            ....|:|.:.:.:..   .|:.| |.|.:|.....| |.:..|||::            |.:...
Mouse   144 EVQMSVKEHIMRHTKLQRQTTEP-ASSTRHTSFKRHLPRQMHVSSVD------------YGNELP 195

  Fly   207 PKTI-NPVSLNEVR----------------------GNLHVSLGYDPVGGLLNVRLLEAQNLQPR 248
            |... .|.|:..::                      |.::.||.||.....|.||:|:|.:|..:
Mouse   196 PAAAEQPTSIGRIKPELYKQKSVDGDDAKSEAAKSCGKINFSLRYDYESETLIVRILKAFDLPAK 260

  Fly   249 QFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSR 313
            .|.|::|||.|:.||||:|...|||:|::||||.|||.|.|.|....:..|.:.:.::|||.:||
Mouse   261 DFCGSSDPYVKIYLLPDRKCKLQTRVHRKTLNPTFDENFHFPVPYEELADRKLHLSVFDFDRFSR 325

  Fly   314 HVCIGGSKLHLANL----DLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKA 374
            |..||  ::.|.||    |||.:..:|..:..|:::  .||||:||.||.|||:|.||.:.:||.
Mouse   326 HDMIG--EVILDNLFEASDLSRETSIWKDIQYATSE--SVDLGEIMFSLCYLPTAGRLTLTVIKC 386

  Fly   375 RNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEF 439
            |||:.: |....|||||||:|| ..|:::||:||.:::.||||:||||:.||:..|.:....|..
Mouse   387 RNLKAM-DITGYSDPYVKVSLL-CDGRRLKKKKTTIKKNTLNPIYNEAIIFDIPPENMDQVSLLI 449

  Fly   440 TVVHDGLLGSSEILGRTLIGNSPE 463
            :|:....:|.:||:|...:|.:.|
Mouse   450 SVMDYDRVGHNEIIGVCRVGINAE 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 52/148 (35%)
C2B_Synaptotagmin 352..488 CDD:175975 50/112 (45%)
Syt6XP_006501767.1 C2A_Synaptotagmin-1-5-6-9-10 231..355 CDD:176031 52/125 (42%)
C2B_Synaptotagmin-3-5-6-9-10 364..497 CDD:176048 50/112 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.